Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sirpb1aA0A0A6YYP6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm37025-201ENSMUST00000195159 829 ntBASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm10653-202ENSMUST00000139570 835 ntBASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sirpb1aA0A0A6YYP6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms