Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav15d-1-dv6d-1A0A075B624 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.15□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm37179-201ENSMUST00000194862 823 ntBASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms