Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AL391994.1-201ENST00000254724 282 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 SNORA56-201ENST00000383966 129 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 GSTM3P2-201ENST00000412746 530 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 P2RY10P2-201ENST00000416730 913 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AL136231.1-201ENST00000429407 730 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 GSTM5P1-201ENST00000434751 660 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 VN1R54P-201ENST00000435210 1049 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 ELOCP8-201ENST00000439309 332 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 ELOCP15-201ENST00000442090 332 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 RPL7P59-201ENST00000447700 943 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC005912.1-201ENST00000495392 255 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 RPSAP51-201ENST00000497462 645 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC008885.2-201ENST00000509506 930 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC109471.1-201ENST00000511631 612 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC022360.1-201ENST00000521058 340 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AP001207.1-201ENST00000524051 481 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AP003033.1-201ENST00000527244 415 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AP001189.2-201ENST00000527320 189 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC024909.2-201ENST00000553035 286 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 BLZF2P-201ENST00000553776 1130 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 VN1R90P-201ENST00000595717 726 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC103881.1-201ENST00000603476 538 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC133552.5-201ENST00000604266 540 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 HULC.1-201ENST00000612720 240 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC243654.2-201ENST00000612843 443 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC073348.1-201ENST00000623002 331 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AF246928.1-201ENST00000623768 87 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AP003400.3-201ENST00000624904 346 ntBASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB1Q9Y5F3 AC093775.1-201ENST00000624154 1868 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC011447.7-201ENST00000624228 1590 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 Y_RNA.77-201ENST00000362962 107 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-623P-201ENST00000363143 105 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RPS3AP26-201ENST00000398259 784 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL133264.1-201ENST00000407157 562 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 RNU2-42P-201ENST00000410697 113 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 TPT1P2-201ENST00000413105 503 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AL022400.1-201ENST00000423946 935 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 SRSF1P1-201ENST00000424058 520 ntBASIC5.34□□□□□ -1.55
PCDHB1Q9Y5F3 AC108075.1-201ENST00000424692 529 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms