Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 AL137918.1-201ENST00000624542 1922 ntBASIC3.93□□□□□ -1.78
CHD7Q9P2D1 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 RNU6-301P-201ENST00000384277 107 ntBASIC3.93□□□□□ -1.78
CHD7Q9P2D1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 AC022968.1-201ENST00000567372 442 ntBASIC3.93□□□□□ -1.78
CHD7Q9P2D1 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.93□□□□□ -1.78
CHD7Q9P2D1 AC026368.1-201ENST00000614934 690 ntBASIC3.93□□□□□ -1.78
CHD7Q9P2D1 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 RNU4-35P-201ENST00000362588 141 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 SETD6P1-201ENST00000444575 317 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AL353743.1-202ENST00000431724 1695 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AC067945.1-201ENST00000342609 618 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 UBE2V1P1-201ENST00000430836 445 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AC006504.3-201ENST00000586818 523 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 AC104623.2-202ENST00000623477 4002 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.92□□□□□ -1.78
CHD7Q9P2D1 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CHD7Q9P2D1 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 BX323014.1-201ENST00000412876 237 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 RPS15AP29-201ENST00000445539 400 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AC093663.1-201ENST00000497190 394 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 MFSD8-242ENST00000641690 4199 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AC126323.6-202ENST00000568092 3511 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 BCORP1-203ENST00000513194 5093 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 CCRL1P1-201ENST00000449542 1053 ntBASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD7Q9P2D1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AL831737.1-201ENST00000441288 271 ntBASIC3.9□□□□□ -1.78
CHD7Q9P2D1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AC011825.1-201ENST00000484967 388 ntBASIC3.9□□□□□ -1.78
CHD7Q9P2D1 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 PTGES3P3-201ENST00000511479 482 ntBASIC3.9□□□□□ -1.78
CHD7Q9P2D1 NPM1P5-201ENST00000557228 838 ntBASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AC006116.10-201ENST00000591836 581 ntBASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHD7Q9P2D1 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 OR10J6P-201ENST00000289731 930 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AC009506.2-201ENST00000420635 840 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AL645931.1-201ENST00000439737 410 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 RPL32P34-201ENST00000486380 400 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 MIR3945-201ENST00000581853 98 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms