Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC010329.2-201ENST00000595195 2737 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RNA5SP443-201ENST00000363083 132 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RNU1-83P-201ENST00000363426 164 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 SNORA71.2-201ENST00000364941 134 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 Z98745.1-201ENST00000402553 494 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RN7SKP216-201ENST00000411050 312 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 HSFY1P1-201ENST00000423928 1178 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RPL23AP1-201ENST00000428990 471 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 FTH1P16-201ENST00000435241 552 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AL645638.1-201ENST00000440519 361 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RPL7P33-201ENST00000444159 742 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 ARL5AP2-201ENST00000444698 533 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC104982.1-201ENST00000478775 574 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC069306.1-201ENST00000507006 843 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 IGKV2D-10-201ENST00000520194 281 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC138701.1-201ENST00000524329 714 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC015912.2-201ENST00000571053 181 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 RN7SL176P-201ENST00000580352 264 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC209154.1-201ENST00000582156 337 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC124016.2-201ENST00000610058 665 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC100847.1-201ENST00000611316 481 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC084824.4-201ENST00000620106 731 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC015908.5-201ENST00000623289 343 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC093875.1-201ENST00000623688 504 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AL049536.1-201ENST00000625043 744 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 AC010300.1-201ENST00000600671 5134 ntBASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.44□□□□□ -1.7
SPHK1Q9NYA1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RNU5B-4P-201ENST00000363508 111 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RNU6-98P-201ENST00000384173 107 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AL603865.2-201ENST00000401679 213 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RPS3AP23-201ENST00000401762 784 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 HMGB3P31-201ENST00000413333 595 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RPL6P29-201ENST00000414863 865 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC099336.2-201ENST00000422457 254 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 CENPIP1-201ENST00000425713 902 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 ETF1P3-201ENST00000430422 1160 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RPL7P29-201ENST00000437151 728 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC044797.1-201ENST00000445744 679 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC092685.1-201ENST00000447960 1243 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 ISCUP1-201ENST00000454451 448 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC099560.2-201ENST00000457554 255 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RPL7AP28-201ENST00000464513 571 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 PRELID3BP6-201ENST00000503839 571 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AK3P4-201ENST00000504283 583 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC093765.1-201ENST00000603758 881 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC015726.3-201ENST00000624501 418 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC006927.2-201ENST00000639256 389 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 AC013437.2-201ENST00000639587 677 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 DDX18P4-201ENST00000511690 1966 ntBASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPHK1Q9NYA1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms