Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 uc_338.13-201ENST00000618243 179 ntBASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 AC007546.1-201ENST00000619452 559 ntBASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 AP005264.7-201ENST00000625003 745 ntBASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 SYT14P1-202ENST00000600441 1448 ntBASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CTNNBIP1Q9NSA3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 OR5P1P-201ENST00000299512 925 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 RNA5SP167-201ENST00000365461 116 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC114814.2-201ENST00000419195 485 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AL139095.3-201ENST00000419672 1203 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC006065.1-201ENST00000422539 802 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 RPL7AP25-201ENST00000423357 805 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 FAR2P4-202ENST00000425399 584 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC017083.1-201ENST00000428093 483 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 MTCO1P52-201ENST00000433928 531 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 RPS29P19-201ENST00000479709 171 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 RN7SL808P-201ENST00000496066 299 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 BRD9P1-201ENST00000529855 560 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AP003392.5-201ENST00000607857 415 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC103710.3-201ENST00000608157 948 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC243654.2-201ENST00000612843 443 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.41□□□□□ -1.86
CTNNBIP1Q9NSA3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CTNNBIP1Q9NSA3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CTNNBIP1Q9NSA3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.4□□□□□ -1.86
CTNNBIP1Q9NSA3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CTNNBIP1Q9NSA3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CTNNBIP1Q9NSA3 AC008033.1-201ENST00000216407 1162 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 RNU1-87P-201ENST00000363727 170 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 SNORD6-201ENST00000365444 73 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 SNORA70F-201ENST00000384142 135 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 SNORA37-201ENST00000384504 129 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AC013404.1-201ENST00000413068 249 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 RCC2P2-201ENST00000422174 918 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 MTND2P11-201ENST00000423638 648 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 NFYAP1-201ENST00000431953 972 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 MTCYBP29-201ENST00000436327 1006 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 RPS3AP53-201ENST00000454716 778 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 RPS3AP41-201ENST00000462701 778 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AC092324.1-201ENST00000468671 324 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 RPL12P20-201ENST00000475538 479 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 RN7SL629P-201ENST00000489622 285 ntBASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.4□□□□□ -1.87
CTNNBIP1Q9NSA3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms