Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL121950.1-201ENST00000624993 2077 ntBASIC6□□□□□ -1.45
SSU72Q9NP77 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SSU72Q9NP77 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSU72Q9NP77 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6□□□□□ -1.45
SSU72Q9NP77 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC004656.1-201ENST00000568479 4951 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 GAPDHP24-201ENST00000328713 983 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 RNU6-845P-201ENST00000362578 103 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 RNA5SP346-201ENST00000363541 121 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 SNORD81.2-201ENST00000365153 76 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 SNORD115.1-201ENST00000391109 76 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC087752.1-201ENST00000391360 558 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AL603766.1-201ENST00000407763 664 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AL589872.1-201ENST00000426602 288 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 PSMD10P2-201ENST00000432890 672 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC096775.1-201ENST00000437724 448 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 HIGD1AP16-201ENST00000450986 258 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 SNRPGP6-201ENST00000451124 220 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 MTCO1P42-201ENST00000457379 726 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 RNU6-420P-201ENST00000458780 107 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 RPS10P28-201ENST00000480396 498 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC007182.2-201ENST00000489251 402 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC010493.1-201ENST00000513479 292 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 MINOS1P4-201ENST00000515470 318 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 RNA5SP434-201ENST00000516647 121 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC007424.1-203ENST00000554613 687 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 MRPL45P2-203ENST00000573318 473 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 NRBF2P5-201ENST00000603087 788 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 Z95327.3-201ENST00000610385 572 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 RMST_3.1-201ENST00000611651 109 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC027506.1-201ENST00000621395 198 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC018558.4-201ENST00000622153 281 ntBASIC5.99□□□□□ -1.45
SSU72Q9NP77 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SSU72Q9NP77 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSU72Q9NP77 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC090017.1-201ENST00000548612 1779 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ADAM24P-201ENST00000398655 2101 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 RNA5SP375-201ENST00000362975 119 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 RNA5SP211-201ENST00000365516 117 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 RNU6-769P-201ENST00000384407 104 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC073264.1-201ENST00000411508 416 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms