Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 GNRHR2P1-201ENST00000555315 631 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC122134.1-201ENST00000565664 1104 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC126365.2-201ENST00000580630 379 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC020914.4-201ENST00000597690 277 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AP003117.1-201ENST00000602771 554 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC008782.1-201ENST00000603386 430 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC113403.1-201ENST00000604910 193 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AL139022.2-201ENST00000606934 443 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC084824.5-201ENST00000612009 413 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC009704.2-201ENST00000618739 483 ntBASIC5.08□□□□□ -1.6
UPF2Q9HAU5 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPF2Q9HAU5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 MIR365B-201ENST00000362317 111 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 MIR421-201ENST00000365696 85 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 SNORA70F-201ENST00000384142 135 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 RNU1-89P-201ENST00000384592 164 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 RNA5SP105-201ENST00000391123 113 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC023141.6-201ENST00000429418 337 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC011742.1-201ENST00000431448 434 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 Z99127.2-201ENST00000441426 334 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AL158053.1-201ENST00000441503 453 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC018635.1-201ENST00000468292 1030 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC092324.1-201ENST00000468671 324 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 RNU6-491P-201ENST00000516099 110 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 RN7SKP157-201ENST00000516174 282 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 RNA5SP73-201ENST00000516744 108 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AP001922.4-201ENST00000526967 290 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC074029.2-201ENST00000551045 634 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC007599.1-201ENST00000568688 1174 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 MIR4675-201ENST00000577898 77 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AL450270.1-201ENST00000606160 391 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC242628.1-201ENST00000606810 391 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AC022306.3-201ENST00000619930 550 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 AL592494.2-201ENST00000425455 1548 ntBASIC5.07□□□□□ -1.6
UPF2Q9HAU5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
UPF2Q9HAU5 DDX6P1-205ENST00000441966 1436 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 TMSB10P2-201ENST00000416049 131 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC104837.2-201ENST00000427236 424 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 USP12PY-201ENST00000427677 1064 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 XKRY2-201ENST00000442362 1093 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 RPL31P61-201ENST00000496160 376 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC146944.2-203ENST00000502493 354 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC010374.2-201ENST00000512933 535 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC139495.1-202ENST00000513164 354 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC027338.1-201ENST00000514840 825 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 RNU6-319P-201ENST00000516025 108 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 NPM1P6-201ENST00000521088 871 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 BRD9P1-201ENST00000529855 560 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 CKS1BP1-201ENST00000555221 240 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC007448.1-201ENST00000582714 234 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 MRPS35P3-201ENST00000603189 709 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 HMGB1P50-201ENST00000605814 607 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC211433.2-201ENST00000608433 387 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms