Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 RNF6P1-201ENST00000444889 1784 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 RNU6-398P-201ENST00000384143 109 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 RNU6-452P-201ENST00000384406 107 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 RNA5SP332-201ENST00000391063 115 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 PHBP16-201ENST00000446318 950 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC092691.2-201ENST00000461787 803 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 RN7SL810P-201ENST00000493031 276 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 PPM1AP1-201ENST00000502740 1135 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 PARP4P3-201ENST00000510265 317 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 OR5M7P-201ENST00000526140 972 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC069240.1-201ENST00000548774 375 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC106785.3-201ENST00000564064 847 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AL354984.3-201ENST00000604803 325 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 MIR432-201ENST00000606207 94 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC090948.1-201ENST00000607464 549 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC019193.2-201ENST00000610012 634 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC009452.1-201ENST00000640823 606 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC087190.4-201ENST00000574616 8334 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AC009951.1-201ENST00000623674 2614 ntBASIC4.36□□□□□ -1.71
LRRC40Q9H9A6 AL137100.1-201ENST00000556703 1620 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC090229.1-201ENST00000590983 1609 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 IGKV7-3-201ENST00000357453 298 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 MIR192-201ENST00000384915 110 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 MRPS33P4-201ENST00000434892 317 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 RPL34P26-201ENST00000445636 354 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 MTND2P8-201ENST00000450555 1025 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 RPL7P32-201ENST00000457119 744 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 RN7SL98P-201ENST00000462271 300 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 OR4U1P-201ENST00000554958 912 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AL133247.2-201ENST00000603236 482 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AC012618.3-205ENST00000637896 1496 ntBASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC40Q9H9A6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC103591.2-201ENST00000265259 766 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 RNU4-31P-201ENST00000384211 141 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 MIR1179-201ENST00000408703 91 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 RPL23AP52-201ENST00000439311 478 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 MED6P1-201ENST00000439659 713 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 RPL23AP81-201ENST00000455252 467 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms