Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 OR5B10P-201ENST00000532869 642 ntBASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC079171.1-201ENST00000568788 914 ntBASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC025627.2-201ENST00000576220 160 ntBASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC092354.2-201ENST00000607786 514 ntBASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 AC138965.3-201ENST00000623875 498 ntBASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.09□□□□□ -1.59
SHANK3Q9BYB0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 SNORD35B-201ENST00000363660 87 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 RNU6-301P-201ENST00000384277 107 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AC073335.1-201ENST00000427776 363 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 HSPD1P21-201ENST00000436541 245 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AC005726.1-201ENST00000494679 427 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AC007458.1-201ENST00000542812 373 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 AL713922.2-201ENST00000619384 716 ntBASIC5.09□□□□□ -1.6
SHANK3Q9BYB0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 GNG5P1-201ENST00000255500 204 ntBASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.08□□□□□ -1.6
SHANK3Q9BYB0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 VN1R8P-201ENST00000407739 893 ntBASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 ATP5A1P2-201ENST00000412323 255 ntBASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 RPS7P15-201ENST00000415804 584 ntBASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 UBDP1-202ENST00000457888 382 ntBASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 RN7SKP18-201ENST00000516005 275 ntBASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHANK3Q9BYB0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 OR6K3-202ENST00000368146 996 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 MIR195-201ENST00000385194 87 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 RPL23AP89-201ENST00000439324 255 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC124312.6-202ENST00000623624 418 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AP002001.2-201ENST00000529025 1469 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AL591419.1-201ENST00000427423 339 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 MTCO3P22-201ENST00000603219 784 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 MIR8057-201ENST00000620957 69 ntBASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHANK3Q9BYB0 SAMMSON-213ENST00000641336 1521 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms