Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 CYB5AP5-201ENST00000549779 389 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC097505.1-201ENST00000610199 565 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 MIR6780A-201ENST00000615089 68 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 OR8B1P-202ENST00000641132 1178 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 OR14L1P-202ENST00000641545 3009 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC126323.6-202ENST00000568092 3511 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AL603750.1-201ENST00000624216 1717 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 MTND4P10-201ENST00000446199 1363 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC026951.1-201ENST00000559530 2459 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 LINC00622-201ENST00000562811 1570 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 RNU4-24P-201ENST00000364565 139 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AL513175.2-201ENST00000422071 443 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 RPS3AP44-201ENST00000425466 790 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 DEFB130D-201ENST00000426866 237 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC010326.1-201ENST00000462726 602 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 MTND4LP3-201ENST00000468320 276 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC098799.3-201ENST00000506095 438 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC034244.1-201ENST00000507687 207 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC118282.2-201ENST00000508739 374 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 RNU6-319P-201ENST00000516025 108 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC068993.1-201ENST00000546724 589 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AL035411.2-201ENST00000604022 421 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC079610.2-201ENST00000604818 690 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC018638.7-201ENST00000605836 1114 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AL583856.2-201ENST00000606298 543 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC024060.1-201ENST00000607052 494 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AL731566.2-201ENST00000618971 317 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AP001784.1-201ENST00000624107 428 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 AL592182.3-201ENST00000642132 3304 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.6□□□□□ -1.51
SALL3Q9BXA9 OR10AB1P-202ENST00000641219 1686 ntBASIC5.6□□□□□ -1.51
SALL3Q9BXA9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC103591.2-201ENST00000265259 766 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 RNU6-481P-201ENST00000384194 107 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 FCF1P5-201ENST00000406490 482 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AL160175.1-201ENST00000428124 247 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 BX119904.1-201ENST00000432026 348 ntBASIC5.59□□□□□ -1.51
SALL3Q9BXA9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.59□□□□□ -1.51
SALL3Q9BXA9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms