Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 SNORD8-201ENST00000363915 110 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RPL23AP29-201ENST00000397284 453 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 SNORA11.3-201ENST00000408471 128 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RPS17P17-201ENST00000419392 409 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL353729.1-201ENST00000425044 720 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC079807.1-201ENST00000429993 481 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC002486.1-201ENST00000435098 391 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 MTCYBP6-201ENST00000441810 138 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC005077.1-201ENST00000449226 375 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 GAPDHP17-201ENST00000449858 1001 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL513533.1-201ENST00000453728 415 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC103563.5-201ENST00000455643 364 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 ACA64.1-201ENST00000459171 127 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC073594.1-201ENST00000462065 364 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RN7SL221P-201ENST00000466190 281 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC007537.2-201ENST00000472093 511 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC023598.1-201ENST00000472521 361 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 ACTR3P3-201ENST00000480448 893 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC114728.1-201ENST00000488289 483 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC108064.1-201ENST00000513791 460 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 MTND5P4-201ENST00000514978 288 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RNA5SP216-201ENST00000516111 123 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 snoU109.5-201ENST00000516231 132 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RNA5SP340-201ENST00000517132 107 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC109635.6-201ENST00000525487 1113 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC008127.2-201ENST00000549925 1075 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC069304.2-201ENST00000605154 435 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL132765.2-201ENST00000610812 351 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC010205.1-201ENST00000616668 449 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AL031658.2-201ENST00000616850 651 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 SNORA11.6-201ENST00000619030 128 ntBASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP3Q9BWW4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AC096921.2-201ENST00000561507 1916 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNU6-845P-201ENST00000362578 103 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNU6-462P-201ENST00000362659 105 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNA5SP375-201ENST00000362975 119 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 RNU6-244P-201ENST00000391028 104 ntBASIC5.05□□□□□ -1.6
SSBP3Q9BWW4 AL360271.1-201ENST00000395679 510 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms