Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX3Q99909 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 RNA5SP513-201ENST00000364648 118 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSX3Q99909 RNU6-354P-201ENST00000383862 107 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RNU6-1293P-201ENST00000384077 107 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RNU6-610P-201ENST00000384264 107 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSX3Q99909 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 CEACAMP8-201ENST00000413902 580 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX3Q99909 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 AL096829.2-201ENST00000446582 742 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AL096803.2-201ENST00000450032 677 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.1□□□□□ -1.75
SSX3Q99909 SNORD108-201ENST00000459332 71 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AC091180.1-201ENST00000462104 372 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RPS20P21-201ENST00000466859 343 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RPS23P1-201ENST00000491662 432 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC104108.1-201ENST00000509930 412 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AC005351.1-201ENST00000511152 786 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RPL7L1P13-201ENST00000511702 739 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RNU5A-7P-201ENST00000515979 116 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RN7SKP234-201ENST00000517173 224 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 PCNPP1-201ENST00000552501 511 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 MIR4691-201ENST00000583764 85 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AC025946.2-201ENST00000603398 234 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 LLPHP1-201ENST00000603571 367 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 Mico1.1-201ENST00000611698 204 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX3Q99909 MIR6864-201ENST00000617935 70 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 RNU6-156P-201ENST00000621869 107 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 AL138960.2-201ENST00000625145 535 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
SSX3Q99909 DCAF13P1-201ENST00000495256 1330 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.1□□□□□ -1.75
SSX3Q99909 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 Z98755.1-201ENST00000407015 1384 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SSX3Q99909 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX3Q99909 MTCO1P14-201ENST00000441695 1559 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 INTS6P1-201ENST00000504674 2530 ntBASIC4.1□□□□□ -1.75
SSX3Q99909 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSX3Q99909 OR4K17-201ENST00000315543 1032 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 AL109941.1-201ENST00000401925 229 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AL390316.1-201ENST00000406279 553 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX3Q99909 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 AL139128.1-201ENST00000413921 941 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 RPL31P45-201ENST00000419532 356 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AL732292.1-201ENST00000426692 226 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 DEFB130D-201ENST00000426866 237 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.09□□□□□ -1.75
SSX3Q99909 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 MRPL50P1-201ENST00000431951 384 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 NMNAT1P2-201ENST00000435192 860 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC073648.4-201ENST00000442655 781 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 HMGB1P48-201ENST00000446155 598 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AL354714.3-201ENST00000447284 493 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 TRY2P-201ENST00000448860 689 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX3Q99909 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX3Q99909 AC140172.1-201ENST00000502928 141 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC010350.1-201ENST00000504908 231 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 NAMPTP2-201ENST00000505629 1115 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX3Q99909 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.09□□□□□ -1.75
SSX3Q99909 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms