Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 OR11H5P-202ENST00000641612 1325 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 MIR383-201ENST00000362257 73 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 RNU1-14P-201ENST00000362759 152 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 RNU6-152P-201ENST00000384037 107 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AL356806.1-201ENST00000422524 916 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 NIPA2P1-201ENST00000426223 976 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 MTCO3P21-201ENST00000430791 643 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 RN7SL860P-201ENST00000473738 223 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC105137.1-201ENST00000484355 562 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 RN7SL691P-201ENST00000494487 301 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 RPS6P4-201ENST00000494693 758 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC008958.1-201ENST00000511047 682 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 SNORA70.17-201ENST00000516449 133 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 RNA5SP519-201ENST00000516480 119 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 IGKV2D-10-201ENST00000520194 281 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 OR7E10P-201ENST00000526420 991 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 SLC25A36P1-201ENST00000590111 465 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC239803.2-201ENST00000610161 430 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 MIR6716-201ENST00000613413 80 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 MIR3653-201ENST00000625572 110 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
RPRD1AQ96P16 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.42□□□□□ -1.7
RPRD1AQ96P16 AC134882.1-201ENST00000603738 1676 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC005261.4-201ENST00000600047 1385 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 RNU6-304P-201ENST00000364855 107 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC068538.1-201ENST00000376856 336 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 MIR3074-201ENST00000384885 81 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 SNORD66.1-201ENST00000391230 76 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 GSTA12P-201ENST00000402398 508 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 RN7SKP235-201ENST00000410662 305 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AL450992.3-201ENST00000413192 568 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 RPL23AP38-201ENST00000423801 469 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC234779.1-201ENST00000425910 285 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC069285.2-201ENST00000440210 275 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AL353898.1-201ENST00000444055 238 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 NUTF2P3-201ENST00000448540 384 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC104306.1-201ENST00000449702 371 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 RPL23AP81-201ENST00000455252 467 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AL592156.1-201ENST00000508758 304 ntBASIC4.41□□□□□ -1.7
RPRD1AQ96P16 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.41□□□□□ -1.7
RPRD1AQ96P16 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms