Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTP4Q96DX8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RTP4Q96DX8 AL391684.1-202ENST00000641293 1636 ntBASIC4.71□□□□□ -1.66
RTP4Q96DX8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.71□□□□□ -1.66
RTP4Q96DX8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTP4Q96DX8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.71□□□□□ -1.66
RTP4Q96DX8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTP4Q96DX8 NOL8P1-201ENST00000508336 3529 ntBASIC4.71□□□□□ -1.66
RTP4Q96DX8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 MTND5P11-201ENST00000511037 1812 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 CASC19-204ENST00000641001 2055 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 RNU6-1242P-201ENST00000391052 103 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 FABP12P1-201ENST00000401911 322 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC092017.2-201ENST00000427600 362 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 DNAJC19P7-201ENST00000428811 344 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 MTND5P25-201ENST00000430499 799 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AL359265.2-201ENST00000434367 631 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC000041.1-201ENST00000439655 175 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 CR769776.1-201ENST00000441254 787 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 VN1R25P-201ENST00000443385 738 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 RPL21P133-201ENST00000443666 476 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 RN7SL354P-201ENST00000469282 294 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 SYT14P1-201ENST00000481459 721 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 RPS27AP16-201ENST00000492222 470 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC105313.1-201ENST00000509121 353 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC007016.1-201ENST00000512110 244 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 RN7SKP276-201ENST00000516242 268 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 MIR4697-201ENST00000582977 78 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC068790.7-201ENST00000602347 528 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC073091.2-201ENST00000603205 907 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AL139344.1-201ENST00000605228 195 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC107952.2-201ENST00000606048 486 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC008966.2-201ENST00000606157 453 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 AC004943.3-201ENST00000624116 600 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 PCAT14-202ENST00000627127 3935 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RTP4Q96DX8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP4Q96DX8 MAPK10-303ENST00000641324 3959 ntBASIC4.7□□□□□ -1.66
RTP4Q96DX8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 RNU6-31P-201ENST00000384388 108 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 ATP5F1P2-201ENST00000398143 760 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 GLULP6-201ENST00000399502 913 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 MIR298-201ENST00000401212 88 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 Z98745.1-201ENST00000402553 494 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 ATG4AP1-201ENST00000416893 538 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 RPL22P18-201ENST00000417197 377 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 BTF3P9-201ENST00000418784 283 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 RAD23BP1-201ENST00000421404 1227 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 REREP1Y-201ENST00000422655 198 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 REREP2Y-201ENST00000439103 200 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 AL353898.1-201ENST00000444055 238 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 AL161722.1-201ENST00000446972 1032 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 AC090013.1-201ENST00000485147 480 ntBASIC4.69□□□□□ -1.66
RTP4Q96DX8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP4Q96DX8 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP4Q96DX8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms