Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DDX1Q92499 ISCA1P3-201ENST00000577104 373 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.98□□□□□ -1.45
DDX1Q92499 AL390816.3-201ENST00000604527 1066 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AP003117.2-201ENST00000606010 545 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AC007038.2-201ENST00000608095 740 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AC007684.1-201ENST00000609671 477 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AC097505.1-201ENST00000610199 565 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AL121612.2-201ENST00000612261 482 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AL139418.1-201ENST00000613613 177 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 RPSAP73-201ENST00000614820 330 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 MIR6837-201ENST00000620884 64 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
DDX1Q92499 AC095031.1-201ENST00000623685 672 ntBASIC5.98□□□□□ -1.45
DDX1Q92499 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
DDX1Q92499 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DDX1Q92499 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
DDX1Q92499 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
DDX1Q92499 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
DDX1Q92499 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DDX1Q92499 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
DDX1Q92499 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.98□□□□□ -1.45
DDX1Q92499 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
DDX1Q92499 RN7SKP124-201ENST00000364730 341 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 MIR217-201ENST00000384817 110 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 SNORA26.8-201ENST00000391306 124 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 RNU6-272P-201ENST00000411028 104 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.97□□□□□ -1.45
DDX1Q92499 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 AC007161.1-204ENST00000423039 460 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 VDAC1P6-201ENST00000430062 855 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 MTND3P23-201ENST00000431980 347 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 CFL1P1-202ENST00000432948 411 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC006335.2-201ENST00000437993 330 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC093392.2-201ENST00000450682 337 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 FDX1P2-201ENST00000450769 375 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AZGP1P2-201ENST00000454506 345 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 MTND1P16-201ENST00000465177 898 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 SETP11-201ENST00000473027 690 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 HMGB1P36-201ENST00000487709 576 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 RPS6P4-201ENST00000494693 758 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 AC109471.1-201ENST00000511631 612 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.97□□□□□ -1.45
DDX1Q92499 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
DDX1Q92499 DUXAP2-201ENST00000519198 589 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.97□□□□□ -1.45
DDX1Q92499 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
DDX1Q92499 OR5AZ1P-201ENST00000527448 943 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.97□□□□□ -1.45
DDX1Q92499 AC027026.1-201ENST00000532323 742 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.97□□□□□ -1.45
DDX1Q92499 AP000873.5-201ENST00000533906 236 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 HMGN2P6-201ENST00000551091 273 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.97□□□□□ -1.45
DDX1Q92499 VN1R92P-201ENST00000598511 928 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AL137072.1-201ENST00000603444 466 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC090186.1-201ENST00000605991 572 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 AC091946.2-201ENST00000606105 291 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 Z99129.1-201ENST00000612510 255 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 AC087565.3-203ENST00000641018 837 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.97□□□□□ -1.45
DDX1Q92499 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
DDX1Q92499 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.97□□□□□ -1.45
DDX1Q92499 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 SRRM1P3-201ENST00000426911 2678 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 AC109315.1-201ENST00000584143 1347 ntBASIC5.97□□□□□ -1.45
DDX1Q92499 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
DDX1Q92499 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.97□□□□□ -1.45
DDX1Q92499 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.97□□□□□ -1.45
DDX1Q92499 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.97□□□□□ -1.45
DDX1Q92499 AL592429.1-201ENST00000403909 1473 ntBASIC5.96□□□□□ -1.45
DDX1Q92499 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
DDX1Q92499 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
DDX1Q92499 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
DDX1Q92499 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.96□□□□□ -1.46
DDX1Q92499 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.96□□□□□ -1.46
DDX1Q92499 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
DDX1Q92499 AC103591.2-201ENST00000265259 766 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms