Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP332-201ENST00000391063 115 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 RPS16P5-201ENST00000406501 404 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 NRBF2P2-201ENST00000413087 861 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 TRIM60P17-201ENST00000415181 719 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 EIF1P3-201ENST00000423841 334 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AL732292.1-201ENST00000426692 226 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 RPL23AP1-201ENST00000428990 471 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 NANOGP6-201ENST00000429190 847 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 PHBP16-201ENST00000446318 950 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AL451050.1-201ENST00000450126 415 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 MTND2P28-201ENST00000457540 1044 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC010374.1-201ENST00000503762 1237 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 OR8G5-201ENST00000524943 1041 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC093765.1-201ENST00000603758 881 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC113403.1-201ENST00000604910 193 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC012603.1-201ENST00000606424 528 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AL391834.1-201ENST00000609609 560 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 uc_338.13-201ENST00000618243 179 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AC103858.2-201ENST00000621471 543 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 AP003072.4-201ENST00000624580 310 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 OR56B2P-202ENST00000641377 2453 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC079741.1-201ENST00000321498 212 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 RNVU1-6-201ENST00000364688 164 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC136624.1-201ENST00000400791 413 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 MIR1183-201ENST00000408856 89 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AP000357.1-201ENST00000409926 1165 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP39-201ENST00000411245 120 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AL139128.1-201ENST00000413921 941 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AL356387.2-201ENST00000422272 243 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC011998.1-201ENST00000433403 117 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 RNU7-27P-201ENST00000459281 62 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 RPS29P19-201ENST00000479709 171 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AP001180.3-201ENST00000582221 145 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC067852.4-201ENST00000590314 478 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC025175.1-201ENST00000606482 759 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AC099669.2-201ENST00000616549 437 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 IQCB2P-201ENST00000401788 1633 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 AL137100.1-201ENST00000556703 1620 ntBASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.05□□□□□ -1.76
CLHC1Q8NHS4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 RNU6-532P-201ENST00000384318 107 ntBASIC4.04□□□□□ -1.76
CLHC1Q8NHS4 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms