Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL22A1Q8NFW1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL22A1Q8NFW1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AC120036.2-201ENST00000509729 1474 ntBASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AP002001.2-201ENST00000529025 1469 ntBASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AC026368.1-201ENST00000614934 690 ntBASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AL513548.1-201ENST00000562904 1724 ntBASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 AL132656.3-201ENST00000606384 1595 ntBASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL22A1Q8NFW1 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 Y_RNA.500-201ENST00000384466 111 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 SNORA48.2-201ENST00000390926 124 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 NPM1P38-201ENST00000403835 865 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 ZNF602P-201ENST00000405929 924 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AL391219.1-201ENST00000422570 483 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AL591363.1-201ENST00000450091 483 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 RN7SKP46-201ENST00000515942 234 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 PHBP17-201ENST00000528576 541 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 MIR6852-201ENST00000621699 66 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AC015722.2-201ENST00000622210 551 ntBASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.24□□□□□ -1.57
COL22A1Q8NFW1 AP001284.1-201ENST00000528393 2118 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC234772.1-201ENST00000377927 937 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC005300.1-201ENST00000428401 373 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC005326.1-201ENST00000429197 123 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 KATNBL1P2-201ENST00000433311 835 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 EIF4A1P11-201ENST00000451239 222 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 CYCSP35-201ENST00000451978 304 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 RPL23AP65-201ENST00000475608 468 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 BTG4P1-201ENST00000510421 183 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 SNORA70.17-201ENST00000516449 133 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC064801.1-201ENST00000612025 407 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 CR392039.4-201ENST00000624968 501 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 DYNLL1P7-201ENST00000429273 258 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 PRELID3BP10-201ENST00000431957 584 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC012158.1-204ENST00000483430 465 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 RPL23AP87-202ENST00000573039 466 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AL451044.1-201ENST00000604867 238 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 AL157762.1-201ENST00000619612 415 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.23□□□□□ -1.57
COL22A1Q8NFW1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL22A1Q8NFW1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.22□□□□□ -1.57
COL22A1Q8NFW1 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL22A1Q8NFW1 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL22A1Q8NFW1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms