Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC099522.1-202ENST00000514718 367 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 RAB9BP1-201ENST00000519581 626 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC034205.1-201ENST00000520621 638 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 IPO5P1-202ENST00000600039 287 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC123786.2-201ENST00000603459 275 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 uc_338.32-201ENST00000615087 172 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AC074276.2-201ENST00000619891 348 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 AP005264.7-201ENST00000625003 745 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 Z82217.1-201ENST00000625157 8149 ntBASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC65Q8IXS2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 MIR383-201ENST00000362257 73 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AL161909.1-201ENST00000397390 712 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 COX6B1P7-201ENST00000430845 235 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 BTF3P10-201ENST00000433415 495 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 RPL36AP13-201ENST00000457490 317 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 UQCRHP4-201ENST00000471686 272 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC108475.1-201ENST00000507880 950 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC069240.1-201ENST00000548774 375 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC022655.2-201ENST00000577280 318 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 FAM106CP-201ENST00000582212 507 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AL592494.3-201ENST00000609485 464 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 AC107905.1-201ENST00000616204 426 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 MIR3653-201ENST00000625572 110 ntBASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
CCDC65Q8IXS2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AP000357.1-201ENST00000409926 1165 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 TRIM60P17-201ENST00000415181 719 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 RPA2P2-201ENST00000419698 796 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AC073143.1-201ENST00000436316 395 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 RNA5SP246-201ENST00000458909 119 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AC091167.1-201ENST00000492017 396 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AC106806.2-201ENST00000509365 500 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 C1GALT1P3-201ENST00000522049 819 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 UBTFL9-201ENST00000534504 1148 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AC116447.1-201ENST00000613153 453 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 AL031985.3-201ENST00000565390 2449 ntBASIC4.61□□□□□ -1.67
CCDC65Q8IXS2 ERCC6-202ENST00000374127 1782 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC009229.4-201ENST00000623854 1947 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 MARK2P15-201ENST00000432204 2186 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 RPL7P28-201ENST00000437739 740 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AL353748.1-201ENST00000440753 474 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AL451050.1-201ENST00000450126 415 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 RPL21P71-201ENST00000465598 459 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC022336.1-201ENST00000475510 337 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms