Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CEACAMP1-201ENST00000434624 1035 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AL512326.1-201ENST00000443050 721 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC002553.2-201ENST00000453217 340 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AL121877.1-201ENST00000453704 622 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 FGF7P3-201ENST00000454645 303 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 CYCSP53-201ENST00000455540 265 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RPL7AP52-201ENST00000458096 790 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RN7SL41P-201ENST00000476144 297 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC092593.2-201ENST00000513866 913 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RNA5SP49-201ENST00000516450 115 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RNA5SP519-201ENST00000516480 119 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 HAUS1P3-201ENST00000523909 662 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC093014.1-201ENST00000548926 724 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 CBX3P2-202ENST00000583365 535 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 ARF4P1-201ENST00000605447 541 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AL512506.1-201ENST00000613918 449 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC008013.2-202ENST00000637965 364 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AL356489.2-201ENST00000566968 3528 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 RNU1-14P-201ENST00000362759 152 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 RNU6-666P-201ENST00000363499 107 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC068538.1-201ENST00000376856 336 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 ATP5F1P2-201ENST00000398143 760 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 RN7SKP235-201ENST00000410662 305 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 RPL6P29-201ENST00000414863 865 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 EIF1P3-201ENST00000423841 334 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 HMGB1P5-202ENST00000451497 985 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC009963.2-201ENST00000453431 138 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 RPL10P17-201ENST00000453852 316 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 UQCRHP4-201ENST00000471686 272 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC107398.1-201ENST00000486904 505 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC091167.1-201ENST00000492017 396 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC108475.1-201ENST00000507880 950 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC010468.3-201ENST00000508225 458 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC008628.1-201ENST00000508663 265 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AL592156.1-201ENST00000508758 304 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 RN7SKP122-201ENST00000515923 296 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC006064.5-201ENST00000541782 248 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AL109766.1-201ENST00000555080 552 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC069366.1-201ENST00000583159 838 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 IPO5P1-202ENST00000600039 287 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC124856.1-201ENST00000600819 896 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC026979.4-201ENST00000606555 645 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AL445567.2-201ENST00000618935 498 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC019278.1-201ENST00000623516 479 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC090617.9-201ENST00000623751 147 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 MIR3653-201ENST00000625572 110 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 MIR6830-201ENST00000636015 70 ntBASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf40Q8IXQ3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.77
C9orf40Q8IXQ3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
C9orf40Q8IXQ3 AC093775.1-201ENST00000624154 1868 ntBASIC3.96□□□□□ -1.77
C9orf40Q8IXQ3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
C9orf40Q8IXQ3 AC105074.1-201ENST00000623380 3095 ntBASIC3.96□□□□□ -1.77
C9orf40Q8IXQ3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms