Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC009229.4-201ENST00000623854 1947 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL136164.3-201ENST00000624429 3978 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC100871.1-201ENST00000507871 1456 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 SNORA68.2-201ENST00000391263 128 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 RN7SKP97-201ENST00000410966 333 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC092745.2-202ENST00000411880 369 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL807761.1-201ENST00000417622 171 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL645608.4-201ENST00000423619 154 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 RPS24P8-201ENST00000431490 402 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 CBX1P4-201ENST00000439415 457 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL591719.1-201ENST00000444669 744 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC068135.1-201ENST00000446164 246 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 RNU7-140P-201ENST00000459546 60 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 HIGD1AP5-201ENST00000529959 259 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC234771.5-201ENST00000600161 514 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC015908.5-201ENST00000623289 343 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL121594.5-201ENST00000631724 573 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 BX649567.1-201ENST00000642071 1134 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 AC107068.1-201ENST00000563286 4218 ntBASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN4BQ8IWT1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.61
SCN4BQ8IWT1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AL450326.2-201ENST00000421913 1962 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 MAPK10-328ENST00000641553 4009 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 RNU6-353P-201ENST00000364266 108 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 RNU6-317P-201ENST00000384031 107 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 TAS2R15P-201ENST00000390674 928 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AF228730.1-201ENST00000397972 663 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 MTCO1P56-201ENST00000401674 224 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 RN7SKP199-201ENST00000410325 305 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC007738.1-201ENST00000413892 348 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AL353597.2-202ENST00000434901 373 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 H2AFZP6-201ENST00000444403 394 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 CEACAMP6-201ENST00000452007 574 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AL513533.1-201ENST00000453728 415 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 PTGES3P5-201ENST00000455109 434 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 RPL23AP37-201ENST00000479658 549 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 MTND4LP2-201ENST00000502312 285 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 RNA5SP230-201ENST00000517039 122 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 RPL23AP53-201ENST00000521854 457 ntBASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4BQ8IWT1 AL390726.5-202ENST00000564800 256 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms