Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RN7SL303P-201ENST00000469773 251 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 MTND6P6-201ENST00000478031 263 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC025674.1-201ENST00000507074 324 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC099522.1-202ENST00000514718 367 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC068714.1-201ENST00000559623 800 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC079171.1-201ENST00000568788 914 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 RPL23AP87-202ENST00000573039 466 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 MIR5096-201ENST00000583713 70 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AL139395.1-201ENST00000603662 160 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AL121873.1-201ENST00000616013 524 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AC233309.1-201ENST00000619522 751 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 MARK2P15-201ENST00000432204 2186 ntBASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL3Q8IVW4 AP001486.2-201ENST00000561652 5113 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC116667.1-201ENST00000604855 2072 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC007529.1-201ENST00000418574 2178 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 RNA5SP239-201ENST00000410218 129 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 RPL26P29-201ENST00000415623 438 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 VDAC1P6-201ENST00000430062 855 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 COX6B1P7-201ENST00000430845 235 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 OR6C71P-201ENST00000432580 913 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 BTF3P10-201ENST00000433415 495 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC006011.1-201ENST00000442758 349 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 CEACAMP9-201ENST00000442990 513 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 RPS29P33-201ENST00000456717 146 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC096741.1-201ENST00000472250 846 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC093824.1-201ENST00000508796 343 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 SNORA26.10-201ENST00000516427 141 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 RNU7-143P-201ENST00000516781 65 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 SMARCE1P4-201ENST00000523647 241 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 MIR4330-201ENST00000579077 105 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC068020.1-201ENST00000594215 661 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 GMCL1P2-201ENST00000605230 823 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC128687.2-201ENST00000609657 566 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC090246.1-201ENST00000616499 426 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AL121890.3-201ENST00000618494 516 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC095038.2-201ENST00000621464 1070 ntBASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL3Q8IVW4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 RNA5SP366-201ENST00000365454 123 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 MIR3074-201ENST00000384885 81 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC136624.1-201ENST00000400791 413 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AL807761.1-201ENST00000417622 171 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC092647.1-201ENST00000420654 287 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC023141.6-201ENST00000429418 337 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC068287.1-201ENST00000430283 295 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 TPTE2P3-201ENST00000441562 1189 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 HMGB3P21-201ENST00000452483 547 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 RPL7P1-201ENST00000468161 747 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 RPL7P9-201ENST00000468715 747 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 RN7SL738P-201ENST00000470264 297 ntBASIC4.22□□□□□ -1.73
CDKL3Q8IVW4 AC041039.1-201ENST00000485656 536 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms