Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4DQ86TL0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 NMD3P1-201ENST00000439704 1488 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC024560.2-201ENST00000507981 1497 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC068769.1-201ENST00000474767 2426 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 RNU1-49P-201ENST00000363468 159 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 RNU6-1322P-201ENST00000364309 107 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 SNORA32.2-201ENST00000384049 122 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 RPL32P23-201ENST00000397237 405 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 RN7SKP151-201ENST00000410230 316 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 SETP9-201ENST00000423837 832 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 MTCO3P46-201ENST00000425787 232 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL445669.1-201ENST00000426743 755 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC094019.1-201ENST00000434678 472 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 GTF2IP13-201ENST00000438487 386 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 CXCR2P1-202ENST00000443392 1074 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC132479.1-201ENST00000449160 144 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 NPM1P39-201ENST00000449818 867 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL133351.3-201ENST00000454998 193 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 RN7SL552P-201ENST00000462094 276 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC099521.1-201ENST00000482557 334 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 MTND1P3-201ENST00000484956 952 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 SNORA74.1-201ENST00000516320 180 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC011853.1-201ENST00000518911 454 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 PHBP17-201ENST00000528576 541 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC068714.1-201ENST00000559623 800 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 ZNF322P1-201ENST00000568013 1209 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC005668.1-201ENST00000571142 476 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 MIR3682-201ENST00000581338 84 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL499605.1-201ENST00000604628 403 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL355472.4-201ENST00000610233 626 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 MIR6071-201ENST00000616741 78 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL591926.1-201ENST00000620542 217 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AL162377.2-201ENST00000624532 337 ntBASIC5.65□□□□□ -1.5
ATG4DQ86TL0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4DQ86TL0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 AC107982.1-201ENST00000507171 1300 ntBASIC5.65□□□□□ -1.51
ATG4DQ86TL0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.65□□□□□ -1.51
ATG4DQ86TL0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4DQ86TL0 RNA5SP346-201ENST00000363541 121 ntBASIC5.64□□□□□ -1.51
ATG4DQ86TL0 RNU6-282P-201ENST00000365357 103 ntBASIC5.64□□□□□ -1.51
ATG4DQ86TL0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms