Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 OR51B8P-201ENST00000449892 769 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 NAP1L1P3-201ENST00000462291 880 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC108751.2-201ENST00000469993 231 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC087879.1-201ENST00000474343 374 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC091959.2-201ENST00000477363 321 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 RPL32P9-201ENST00000487963 407 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC016065.2-201ENST00000514530 444 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 HIGD1AP3-201ENST00000515857 278 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC134698.5-201ENST00000519444 336 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 HIGD1AP6-201ENST00000521833 279 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AP000676.2-201ENST00000529711 301 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC126177.5-201ENST00000549599 178 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 CYB5AP5-201ENST00000549779 389 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 MTND4LP25-201ENST00000570218 163 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 BNIP3P35-201ENST00000604530 490 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 BNIP3P19-201ENST00000605397 577 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC120053.1-201ENST00000607706 736 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC126915.2-201ENST00000610957 190 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC026368.1-201ENST00000614934 690 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AL121890.3-201ENST00000618494 516 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC118658.2-201ENST00000618697 459 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC136428.4-201ENST00000634254 1155 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC068620.4-201ENST00000636730 1182 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 MTND5P28-201ENST00000438005 1594 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 SNORA63.3-201ENST00000362682 132 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 GCNT6-201ENST00000379591 934 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 RNU6-171P-201ENST00000384354 107 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL645927.1-201ENST00000396783 406 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL355379.1-201ENST00000405542 640 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 UBE2V1P9-201ENST00000414760 368 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 TAF13P2-201ENST00000416876 286 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 SRSF1P1-201ENST00000424058 520 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 UBE2V1P6-201ENST00000430840 422 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 RPL7P33-201ENST00000444159 742 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 Z77249.1-201ENST00000444622 1175 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 FAR2P1-206ENST00000449736 709 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 HMGB3P30-201ENST00000457863 606 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC108161.1-201ENST00000461060 402 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC109462.1-201ENST00000491087 368 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 SNRPCP2-201ENST00000504370 475 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 NAMPTP2-201ENST00000505629 1115 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 RPL23AP53-201ENST00000521854 457 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC073091.2-201ENST00000603205 907 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AP002906.1-201ENST00000603405 233 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC095055.1-201ENST00000603472 1113 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 RNF138P2-201ENST00000603490 592 ntBASIC4.32□□□□□ -1.72
C11orf88Q6PI97 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.32□□□□□ -1.72
C11orf88Q6PI97 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms