Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AP000769.2-201ENST00000602344 396 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AP000346.3-201ENST00000622821 210 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC099654.6-201ENST00000636487 512 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 MIR3974-201ENST00000637126 96 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC135068.12-201ENST00000637370 931 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC073869.10-201ENST00000642016 354 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC112198.2-201ENST00000426589 6996 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 U3.3-201ENST00000362986 216 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 RNU1-146P-201ENST00000364015 165 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 RNU6-707P-201ENST00000364647 95 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 MIR1302-8-201ENST00000408342 128 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 MIR1182-201ENST00000408363 97 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 COX6CP17-201ENST00000421389 185 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 GAPDHP49-201ENST00000421421 961 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 USP9YP11-201ENST00000427537 717 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 C4BPAP2-201ENST00000428434 478 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AP001324.1-201ENST00000428553 399 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 HSPD1P12-201ENST00000429127 1069 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC096638.2-201ENST00000434965 711 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 ATP5C1P1-201ENST00000441945 895 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 OR7H2P-201ENST00000513483 306 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 SNORA3.4-201ENST00000515969 96 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC009117.1-201ENST00000563948 554 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 MIR4691-201ENST00000583764 85 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC006840.1-201ENST00000623069 542 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 AC092608.3-201ENST00000625017 386 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 MFSD8-245ENST00000641743 948 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 MTND4P5-201ENST00000435821 1374 ntBASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SLC44A4Q53GD3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 OR5H2-201ENST00000355273 945 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 RNU6-398P-201ENST00000384143 109 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms