Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 RN7SL271P-201ENST00000487601 295 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AL389895.1-201ENST00000554127 252 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 MRPS35P3-201ENST00000603189 709 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC008782.1-201ENST00000603386 430 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC113403.1-201ENST00000604910 193 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC140479.6-201ENST00000633535 357 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 MTCO1P11-201ENST00000429111 1528 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 RN7SKP103-201ENST00000363848 320 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 EI24P2-201ENST00000397776 1076 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AC069218.2-201ENST00000411665 344 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AC127526.1-201ENST00000417526 366 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 VDAC1P6-201ENST00000430062 855 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 CEACAMP6-201ENST00000452007 574 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 RPS3AP53-201ENST00000454716 778 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 RPL12P20-201ENST00000475538 479 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AC004453.1-201ENST00000487895 408 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 RPL31P61-201ENST00000496160 376 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AC084783.1-201ENST00000565846 910 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AL445222.1-201ENST00000607259 628 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 Z82217.1-201ENST00000625157 8149 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 OR56B2P-202ENST00000641377 2453 ntBASIC3.68□□□□□ -1.82
CCDC58Q4VC31 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC58Q4VC31 SPATA2P1-201ENST00000431223 2055 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 RIOK3P1-201ENST00000418778 1528 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 OR4K15-201ENST00000305051 1216 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 MIR331-201ENST00000362302 94 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 SSR1P1-201ENST00000407630 814 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 PGBD4P8-201ENST00000412993 562 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 TMSB10P2-201ENST00000416049 131 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC087650.1-201ENST00000431445 468 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC096638.2-201ENST00000434965 711 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 VN1R54P-201ENST00000435210 1049 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 RPL36AP15-201ENST00000444514 266 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC005798.1-201ENST00000513715 387 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AP001922.4-201ENST00000526967 290 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 HIGD1AP10-201ENST00000527837 282 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 BRD9P1-201ENST00000529855 560 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC008147.3-201ENST00000548666 354 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC006254.3-201ENST00000603353 884 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC012409.3-201ENST00000611343 981 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AL773545.4-201ENST00000637262 310 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms