Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 SCARNA15-201ENST00000607520 4325 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 ANKRD36P1-201ENST00000344424 659 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 SNORD113.2-201ENST00000364166 89 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 SNORD116-2-201ENST00000384274 95 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 SNORD116-6-201ENST00000384711 96 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 RN7SKP247-201ENST00000411094 308 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 ELOCP19-201ENST00000411919 318 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC048351.1-201ENST00000420064 602 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 VDAC1P6-201ENST00000430062 855 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CDY14P-201ENST00000431260 1014 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 PTGES3P1-201ENST00000439531 483 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CDY12P-201ENST00000440679 1015 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC002542.1-201ENST00000440683 193 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL591719.1-201ENST00000444669 744 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CDY13P-201ENST00000445813 1015 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CASP3P1-201ENST00000446037 609 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL050341.1-201ENST00000447743 313 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL591363.1-201ENST00000450091 483 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CDY23P-201ENST00000451661 1014 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 HPRT1P2-201ENST00000505250 544 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC113420.1-201ENST00000507903 571 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 PRELID3BP4-201ENST00000515476 571 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 RNU2-30P-201ENST00000516209 141 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 OR8I1P-201ENST00000529291 931 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC009643.1-201ENST00000532030 391 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL110118.1-201ENST00000553543 400 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 MTCYBP28-201ENST00000566728 1132 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL035461.2-201ENST00000619201 524 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC019206.1-201ENST00000621938 425 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AC016717.3-201ENST00000624730 554 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 AL022322.2-201ENST00000624072 20397 ntBASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM71Q2Q1W2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC025574.1-201ENST00000554784 1653 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 MUC2-202ENST00000613187 4845 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC008079.2-201ENST00000623543 20396 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AL445523.1-201ENST00000451184 1362 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 MIR129-1-201ENST00000384972 72 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 CHIAP3-201ENST00000423668 1133 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AL732292.1-201ENST00000426692 226 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 RPL7P34-201ENST00000433316 712 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC016831.4-201ENST00000438302 307 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 OR10R1P-201ENST00000441524 1141 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC068135.1-201ENST00000446164 246 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC244505.3-201ENST00000454598 187 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 RPL7AP52-201ENST00000458096 790 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 RPL23AP12-201ENST00000467573 473 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC117522.2-201ENST00000510049 657 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC119751.1-201ENST00000513357 765 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 RNU6-311P-201ENST00000516224 102 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 ATP5J2P6-201ENST00000565203 266 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC073091.2-201ENST00000603205 907 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AC012557.2-201ENST00000605919 418 ntBASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM71Q2Q1W2 AL359757.1-201ENST00000623176 255 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms