Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGN3Q15651 GNRHR2P1-201ENST00000555315 631 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 PSMB7P1-201ENST00000556349 514 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 AC022968.1-201ENST00000567372 442 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGN3Q15651 MIR5684-201ENST00000585074 65 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 AL451044.1-201ENST00000604867 238 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 AL356218.2-201ENST00000605264 187 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 AP000255.1-201ENST00000610276 676 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 AL592295.2-201ENST00000612578 206 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 RNVU1-4-201ENST00000612985 164 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 MIR7151-201ENST00000617477 60 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HMGN3Q15651 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGN3Q15651 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HMGN3Q15651 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGN3Q15651 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGN3Q15651 AL929601.4-201ENST00000613011 1341 ntBASIC3.39□□□□□ -1.87
HMGN3Q15651 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HMGN3Q15651 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGN3Q15651 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGN3Q15651 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HMGN3Q15651 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
HMGN3Q15651 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 RNA5SP509-201ENST00000364577 119 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 RNA5SP366-201ENST00000365454 123 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 MIR137-201ENST00000385223 102 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 AL161909.1-201ENST00000397390 712 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 RPS4XP9-201ENST00000405151 780 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGN3Q15651 RNA5SP239-201ENST00000410218 129 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGN3Q15651 AL358472.1-201ENST00000431295 329 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGN3Q15651 VN1R25P-201ENST00000443385 738 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 ANP32BP2-201ENST00000454525 545 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 VN1R40P-201ENST00000455196 941 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 NDUFA12P1-201ENST00000455914 406 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 RPL7P48-201ENST00000461513 746 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGN3Q15651 S100A11P1-201ENST00000477525 312 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 RPS23P1-201ENST00000491662 432 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 HPRT1P2-201ENST00000505250 544 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGN3Q15651 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGN3Q15651 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGN3Q15651 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGN3Q15651 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGN3Q15651 AP000346.3-201ENST00000622821 210 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 AP002967.1-201ENST00000624203 539 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 MIR7153-201ENST00000637758 57 ntBASIC3.38□□□□□ -1.87
HMGN3Q15651 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGN3Q15651 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HMGN3Q15651 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGN3Q15651 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC139713.2-214ENST00000642059 1811 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGN3Q15651 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HMGN3Q15651 IGKV7-3-201ENST00000357453 298 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 SNORA60-201ENST00000362396 134 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 SNORD35B-201ENST00000363660 87 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 MIR1251-201ENST00000408552 70 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 AC009237.5-201ENST00000414271 501 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 AL732292.1-201ENST00000426692 226 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 AC017083.1-201ENST00000428093 483 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 FTH1P6-201ENST00000430768 320 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGN3Q15651 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC011276.1-201ENST00000469688 323 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 RN7SL303P-201ENST00000469773 251 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 RPS29P22-201ENST00000472363 168 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 RN7SL481P-201ENST00000477764 299 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 AC007686.1-201ENST00000488511 463 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 AC004069.2-201ENST00000505438 1114 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGN3Q15651 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGN3Q15651 MIR5096-201ENST00000583713 70 ntBASIC3.37□□□□□ -1.87
HMGN3Q15651 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms