Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AL513478.4-201ENST00000641636 310 ntBASIC4.31□□□□□ -1.72
SIX1Q15475 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SIX1Q15475 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX1Q15475 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX1Q15475 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SIX1Q15475 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SIX1Q15475 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SIX1Q15475 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SIX1Q15475 RPS3AP23-201ENST00000401762 784 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AL353692.2-201ENST00000407054 335 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 PGBD4P8-201ENST00000412993 562 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX1Q15475 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.3□□□□□ -1.72
SIX1Q15475 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC006326.1-201ENST00000445465 787 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC104306.1-201ENST00000449702 371 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX1Q15475 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.3□□□□□ -1.72
SIX1Q15475 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX1Q15475 RN7SL459P-201ENST00000481078 302 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX1Q15475 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 KRT19P6-201ENST00000510983 209 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC034244.2-201ENST00000514668 858 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 SNORA76.2-201ENST00000517095 137 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 NOP56P3-201ENST00000549457 385 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.3□□□□□ -1.72
SIX1Q15475 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC090515.3-201ENST00000560431 315 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC079148.1-201ENST00000565944 819 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC233266.2-201ENST00000567067 528 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 FAM106CP-201ENST00000582212 507 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.3□□□□□ -1.72
SIX1Q15475 ELOCP28-201ENST00000590044 317 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 ZNF92P2-201ENST00000600543 1059 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC005776.1-201ENST00000603164 290 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC114878.2-201ENST00000604863 1251 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 BNIP3P19-201ENST00000605397 577 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC144521.1-201ENST00000607148 956 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AL096803.3-201ENST00000609032 532 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC074140.1-201ENST00000621617 208 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AC105105.5-201ENST00000622635 1294 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX1Q15475 AC106858.1-201ENST00000637497 429 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 TMEM30CP-203ENST00000637814 1035 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 MFSD8-242ENST00000641690 4199 ntBASIC4.3□□□□□ -1.72
SIX1Q15475 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SIX1Q15475 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIX1Q15475 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX1Q15475 AL137100.1-201ENST00000556703 1620 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX1Q15475 AC025031.4-201ENST00000621248 3271 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX1Q15475 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX1Q15475 RNA5SP105-201ENST00000391123 113 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX1Q15475 RNU2-22P-201ENST00000411266 212 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX1Q15475 MTCYBP7-201ENST00000419540 1134 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 PTP4A1P1-201ENST00000420539 515 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AL121882.1-201ENST00000422893 417 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC009480.2-201ENST00000422916 432 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX1Q15475 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX1Q15475 ELOCP3-201ENST00000439303 348 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX1Q15475 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX1Q15475 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX1Q15475 AL591623.2-201ENST00000449978 222 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX1Q15475 MTND2P6-201ENST00000455337 1030 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 NDUFA5P9-201ENST00000472609 340 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 NIP7P2-201ENST00000485801 544 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms