Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 GAPDHP17-201ENST00000449858 1001 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 FABP3P2-201ENST00000453169 399 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AC091564.1-201ENST00000464563 479 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.29□□□□□ -1.4
SOX4Q06945 AC104687.1-201ENST00000485829 412 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.29□□□□□ -1.4
SOX4Q06945 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 FGF7P4-201ENST00000509595 295 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.29□□□□□ -1.4
SOX4Q06945 RNA5SP116-201ENST00000516132 98 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 Y_RNA.693-201ENST00000516641 110 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 CYCSP22-201ENST00000517555 339 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 IGHV3-63-201ENST00000518422 341 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.29□□□□□ -1.4
SOX4Q06945 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.29□□□□□ -1.4
SOX4Q06945 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 AC027667.1-201ENST00000545814 304 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AC010547.6-201ENST00000571789 193 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AC005725.1-201ENST00000577346 2607 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SOX4Q06945 AC009977.1-201ENST00000586015 570 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.29□□□□□ -1.4
SOX4Q06945 PRELID3BP8-201ENST00000604148 295 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.29□□□□□ -1.4
SOX4Q06945 AL355974.3-201ENST00000617383 467 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 OR4G11P-202ENST00000642116 1414 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SOX4Q06945 AC009779.8-201ENST00000641684 4384 ntBASIC6.29□□□□□ -1.4
SOX4Q06945 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SOX4Q06945 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX4Q06945 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SOX4Q06945 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.29□□□□□ -1.4
SOX4Q06945 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SOX4Q06945 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SOX4Q06945 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX4Q06945 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX4Q06945 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 GDI2P1-201ENST00000429312 1336 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 MFSD8-219ENST00000641228 2559 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SOX4Q06945 RNU6-1085P-201ENST00000363576 107 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 AL357752.1-201ENST00000412817 349 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AL450992.3-201ENST00000413192 568 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC114814.2-201ENST00000419195 485 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AL662874.1-201ENST00000426065 230 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 DPY19L1P2-201ENST00000426647 915 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 BMS1P19-201ENST00000433925 393 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX4Q06945 NPM1P39-201ENST00000449818 867 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC018638.3-201ENST00000461273 132 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 ACTR3P3-201ENST00000480448 893 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC099521.1-201ENST00000482557 334 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 EIF3LP3-201ENST00000495197 822 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 RN7SL284P-201ENST00000498823 275 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 HMGB1P28-201ENST00000507778 552 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 MIR2117-201ENST00000516780 80 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC008429.4-201ENST00000521201 182 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX4Q06945 AL512310.1-201ENST00000548639 172 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AL390334.1-201ENST00000556395 450 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC012182.1-201ENST00000570133 895 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 AL645937.1-201ENST00000641739 1652 ntBASIC6.28□□□□□ -1.4
SOX4Q06945 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX4Q06945 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX4Q06945 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX4Q06945 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX4Q06945 MT-RNR2-201ENST00000387347 1559 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms