Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC010374.1-201ENST00000503762 1237 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC025554.1-201ENST00000505641 188 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC008802.1-201ENST00000519121 791 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AP000827.1-201ENST00000527814 258 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC084783.1-201ENST00000565846 910 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AC093765.1-201ENST00000603758 881 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 U7.8-201ENST00000619968 63 ntBASIC3.22□□□□□ -1.89
HIST1H1AQ02539 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.22□□□□□ -1.89
HIST1H1AQ02539 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.21□□□□□ -1.89
HIST1H1AQ02539 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.89
HIST1H1AQ02539 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.89
HIST1H1AQ02539 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 OR5P1P-201ENST00000299512 925 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 MIR331-201ENST00000362302 94 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 RNA5SP332-201ENST00000391063 115 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AL133270.1-201ENST00000402635 279 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 NFYAP1-201ENST00000431953 972 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 FTH1P16-201ENST00000435241 552 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 RPL23AP89-201ENST00000439324 255 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AC009263.1-201ENST00000441193 1239 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AL353093.1-201ENST00000441292 436 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 PHBP16-201ENST00000446318 950 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 RAD23BP3-201ENST00000454157 1152 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 RPL7P32-201ENST00000457119 744 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 OR52A4P-201ENST00000472867 958 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 RPL23AP72-201ENST00000492447 435 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AC079171.1-201ENST00000568788 914 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 MIR4458-201ENST00000578872 75 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 MIR4512-201ENST00000583257 77 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 AC012409.3-201ENST00000611343 981 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 MIR6780A-201ENST00000615089 68 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 OR56B2P-202ENST00000641377 2453 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 CDY3P-201ENST00000454543 1618 ntBASIC3.21□□□□□ -1.9
HIST1H1AQ02539 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HIST1H1AQ02539 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 TNPO1P3-201ENST00000436471 2662 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 BDP1P-201ENST00000582658 1990 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AMZ2P2-201ENST00000406819 1057 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 MIR1179-201ENST00000408703 91 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC119751.6-201ENST00000416712 186 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 RPEP3-201ENST00000425462 676 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 MTCO1P54-201ENST00000430139 712 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 RAB9AP5-201ENST00000437794 597 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 RAB9AP2-201ENST00000443911 597 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AL136097.1-201ENST00000456945 913 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AP001086.1-201ENST00000494882 321 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC111000.3-201ENST00000508057 576 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC006064.5-201ENST00000541782 248 ntBASIC3.2□□□□□ -1.9
HIST1H1AQ02539 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.2□□□□□ -1.9
HIST1H1AQ02539 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms