Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 RPL12P46-201ENST00000436610 195 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 GTF2IP7-202ENST00000436677 309 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CL1P78423 RPL7P59-201ENST00000447700 943 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 COX6CP18-201ENST00000448769 222 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AL139824.2-201ENST00000458731 1095 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 RPL21P71-201ENST00000465598 459 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC011037.1-201ENST00000483964 558 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 DYNLL1P6-201ENST00000503440 264 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 RPL7L1P13-201ENST00000511702 739 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 RNU6-202P-201ENST00000515998 96 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 RNA5SP92-201ENST00000516437 110 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 RNA5SP34-201ENST00000516887 130 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 RN7SKP260-201ENST00000516907 149 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 IGLV2-28-201ENST00000520681 304 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CL1P78423 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 OR11J2P-201ENST00000555298 907 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 MTND4P33-201ENST00000556706 766 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CL1P78423 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.05□□□□□ -1.76
CX3CL1P78423 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 AC113368.1-201ENST00000603736 382 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CL1P78423 TAS2R6P-201ENST00000605022 826 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC018695.5-201ENST00000605872 315 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AL512624.1-201ENST00000613638 469 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 MIR8069-1-201ENST00000616627 86 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC009159.2-201ENST00000617603 606 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC243756.2-201ENST00000618406 463 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 MIR8069-2-201ENST00000621412 86 ntBASIC4.05□□□□□ -1.76
CX3CL1P78423 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.05□□□□□ -1.76
CX3CL1P78423 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.05□□□□□ -1.76
CX3CL1P78423 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
CX3CL1P78423 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.05□□□□□ -1.76
CX3CL1P78423 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CL1P78423 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CL1P78423 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CL1P78423 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CL1P78423 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 MTND4P8-201ENST00000514997 1362 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CL1P78423 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CL1P78423 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CL1P78423 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CX3CL1P78423 RPL23P2-201ENST00000320371 421 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CX3CL1P78423 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 RNU6-413P-201ENST00000384115 107 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 ERHP2-201ENST00000402323 299 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 HNRNPDP2-201ENST00000406475 478 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 KRR1P1-201ENST00000419430 803 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 AL158073.1-201ENST00000426848 1104 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.04□□□□□ -1.76
CX3CL1P78423 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.04□□□□□ -1.76
CX3CL1P78423 AC092647.2-201ENST00000452998 253 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 RPS15AP1-201ENST00000457423 391 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 AC112206.1-201ENST00000468416 477 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.04□□□□□ -1.76
CX3CL1P78423 RN7SL222P-201ENST00000476452 299 ntBASIC4.04□□□□□ -1.76
CX3CL1P78423 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms