Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMO4P61968 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.87□□□□□ -1.79
LMO4P61968 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LMO4P61968 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 IGKV7-3-201ENST00000357453 298 ntBASIC3.86□□□□□ -1.79
LMO4P61968 RNU4-28P-201ENST00000364739 141 ntBASIC3.86□□□□□ -1.79
LMO4P61968 RNU6-304P-201ENST00000364855 107 ntBASIC3.86□□□□□ -1.79
LMO4P61968 SNORA71.2-201ENST00000364941 134 ntBASIC3.86□□□□□ -1.79
LMO4P61968 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LMO4P61968 SNORD116-8-201ENST00000384365 95 ntBASIC3.86□□□□□ -1.79
LMO4P61968 Z98745.1-201ENST00000402553 494 ntBASIC3.86□□□□□ -1.79
LMO4P61968 RPS27AP11-201ENST00000402798 447 ntBASIC3.86□□□□□ -1.79
LMO4P61968 ARL4AP5-201ENST00000404372 599 ntBASIC3.86□□□□□ -1.79
LMO4P61968 RNU4-74P-201ENST00000411280 161 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AC004690.1-201ENST00000418216 328 ntBASIC3.86□□□□□ -1.79
LMO4P61968 MORF4L1P6-201ENST00000418771 268 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC010099.3-201ENST00000423896 409 ntBASIC3.86□□□□□ -1.79
LMO4P61968 VN1R42P-201ENST00000424651 344 ntBASIC3.86□□□□□ -1.79
LMO4P61968 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AC092017.2-201ENST00000427600 362 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 USP9YP24-201ENST00000434374 697 ntBASIC3.86□□□□□ -1.79
LMO4P61968 RPS7P2-201ENST00000435134 607 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 VN1R25P-201ENST00000443385 738 ntBASIC3.86□□□□□ -1.79
LMO4P61968 USP9YP17-201ENST00000444617 696 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AL358794.1-201ENST00000445689 381 ntBASIC3.86□□□□□ -1.79
LMO4P61968 Z95152.1-201ENST00000453556 656 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC092155.2-201ENST00000454675 477 ntBASIC3.86□□□□□ -1.79
LMO4P61968 CYCSP20-201ENST00000473154 315 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC104763.1-201ENST00000475274 360 ntBASIC3.86□□□□□ -1.79
LMO4P61968 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 AC010486.3-201ENST00000511602 785 ntBASIC3.86□□□□□ -1.79
LMO4P61968 OR10V3P-201ENST00000525712 725 ntBASIC3.86□□□□□ -1.79
LMO4P61968 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.86□□□□□ -1.79
LMO4P61968 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.86□□□□□ -1.79
LMO4P61968 AC068831.4-201ENST00000556118 109 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.86□□□□□ -1.79
LMO4P61968 NPM1P47-201ENST00000560843 856 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC027455.1-201ENST00000574104 594 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 AC008782.1-201ENST00000603386 430 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC115286.1-201ENST00000604298 434 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC093673.2-201ENST00000609674 331 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AL445423.1-201ENST00000609941 536 ntBASIC3.86□□□□□ -1.79
LMO4P61968 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.86□□□□□ -1.79
LMO4P61968 AL121873.1-201ENST00000616013 524 ntBASIC3.86□□□□□ -1.79
LMO4P61968 uc_338.9-201ENST00000617424 182 ntBASIC3.86□□□□□ -1.79
LMO4P61968 AC090617.9-201ENST00000623751 147 ntBASIC3.86□□□□□ -1.79
LMO4P61968 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LMO4P61968 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.86□□□□□ -1.79
LMO4P61968 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 AC108751.5-201ENST00000492880 1336 ntBASIC3.86□□□□□ -1.79
LMO4P61968 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
LMO4P61968 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.86□□□□□ -1.79
LMO4P61968 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LMO4P61968 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.86□□□□□ -1.79
LMO4P61968 RAD17P1-201ENST00000418130 2042 ntBASIC3.85□□□□□ -1.79
LMO4P61968 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 AC125257.1-201ENST00000560400 2930 ntBASIC3.85□□□□□ -1.79
LMO4P61968 AC108467.2-201ENST00000617640 1597 ntBASIC3.85□□□□□ -1.79
LMO4P61968 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
LMO4P61968 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
LMO4P61968 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.85□□□□□ -1.79
LMO4P61968 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LMO4P61968 AC021146.4-201ENST00000309229 279 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms