Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HCFC1P51610 RPL21P47-201ENST00000483696 477 ntBASIC3.9□□□□□ -1.78
HCFC1P51610 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.9□□□□□ -1.78
HCFC1P51610 AC108145.1-201ENST00000503770 153 ntBASIC3.9□□□□□ -1.78
HCFC1P51610 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HCFC1P51610 AC105233.3-201ENST00000531125 744 ntBASIC3.9□□□□□ -1.78
HCFC1P51610 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.9□□□□□ -1.78
HCFC1P51610 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.9□□□□□ -1.78
HCFC1P51610 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.9□□□□□ -1.78
HCFC1P51610 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.9□□□□□ -1.78
HCFC1P51610 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.9□□□□□ -1.78
HCFC1P51610 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.9□□□□□ -1.78
HCFC1P51610 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.9□□□□□ -1.78
HCFC1P51610 AP003485.1-201ENST00000625093 753 ntBASIC3.9□□□□□ -1.78
HCFC1P51610 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
HCFC1P51610 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
HCFC1P51610 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
HCFC1P51610 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
HCFC1P51610 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HCFC1P51610 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HCFC1P51610 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
HCFC1P51610 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.9□□□□□ -1.78
HCFC1P51610 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.9□□□□□ -1.79
HCFC1P51610 AC112198.2-201ENST00000426589 6996 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HCFC1P51610 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HCFC1P51610 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.9□□□□□ -1.79
HCFC1P51610 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 MIR331-201ENST00000362302 94 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 RN7SKP280-201ENST00000364196 304 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 MIR3065-201ENST00000390137 79 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 U3.35-201ENST00000408405 208 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 CBX1P3-201ENST00000413296 527 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 MTCO2P17-201ENST00000424336 677 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 MTCO2P1-201ENST00000424648 477 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AC114973.1-201ENST00000429057 632 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 BTF3P10-201ENST00000433415 495 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HCFC1P51610 RPL21P6-201ENST00000479171 504 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 RPS27AP16-201ENST00000492222 470 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 NAMPTP2-201ENST00000505629 1115 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.9□□□□□ -1.79
HCFC1P51610 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 AP001372.4-201ENST00000524889 472 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.9□□□□□ -1.79
HCFC1P51610 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 AC008126.1-201ENST00000549019 480 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AC025884.1-201ENST00000556034 378 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.9□□□□□ -1.79
HCFC1P51610 AC023825.1-201ENST00000566704 1030 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 RN7SL339P-201ENST00000580597 296 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.9□□□□□ -1.79
HCFC1P51610 AL606834.3-201ENST00000602615 496 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AL354984.3-201ENST00000604803 325 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AL121652.1-201ENST00000608851 448 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 MIR8069-1-201ENST00000616627 86 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 uc_338.13-201ENST00000618243 179 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 MIR8069-2-201ENST00000621412 86 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 AL109659.3-201ENST00000624985 950 ntBASIC3.9□□□□□ -1.79
HCFC1P51610 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.9□□□□□ -1.79
HCFC1P51610 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.9□□□□□ -1.79
HCFC1P51610 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.9□□□□□ -1.79
HCFC1P51610 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCFC1P51610 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HCFC1P51610 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCFC1P51610 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HCFC1P51610 RNU6-252P-201ENST00000363232 107 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCFC1P51610 AL590762.2-201ENST00000395798 571 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 RNA5SP44-201ENST00000410446 133 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 CEACAMP8-201ENST00000413902 580 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC008173.1-201ENST00000418901 264 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.89□□□□□ -1.79
HCFC1P51610 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.89□□□□□ -1.79
HCFC1P51610 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
HCFC1P51610 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.89□□□□□ -1.79
HCFC1P51610 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.89□□□□□ -1.79
HCFC1P51610 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.89□□□□□ -1.79
HCFC1P51610 AC098799.3-201ENST00000506095 438 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.89□□□□□ -1.79
HCFC1P51610 MTND2P32-201ENST00000521584 1038 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.89□□□□□ -1.79
HCFC1P51610 FKBP1BP1-201ENST00000553366 325 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC124283.4-201ENST00000581815 456 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 BNIP3P22-201ENST00000593399 556 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.89□□□□□ -1.79
HCFC1P51610 BPIFA4P-203ENST00000603168 689 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC073137.1-201ENST00000605636 634 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.89□□□□□ -1.79
HCFC1P51610 AL451049.1-201ENST00000608672 497 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 AC008759.3-201ENST00000613300 508 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HCFC1P51610 OR8G7P-201ENST00000616658 848 ntBASIC3.89□□□□□ -1.79
HCFC1P51610 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HCFC1P51610 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
HCFC1P51610 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HCFC1P51610 AL645568.2-201ENST00000432815 1337 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms