Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX3P41225 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 TPT1P3-201ENST00000492841 512 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX3P41225 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX3P41225 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SOX3P41225 AC087894.1-201ENST00000538359 518 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 AC027455.1-201ENST00000574104 594 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX3P41225 MIR4675-201ENST00000577898 77 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 MIR4715-201ENST00000584117 79 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC008507.2-201ENST00000588402 1176 ntBASIC4.24□□□□□ -1.73
SOX3P41225 BNIP3P40-201ENST00000596017 556 ntBASIC4.24□□□□□ -1.73
SOX3P41225 RPL12P25-202ENST00000598100 674 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX3P41225 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.24□□□□□ -1.73
SOX3P41225 AC124016.2-201ENST00000610058 665 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC016597.2-201ENST00000613256 341 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AC023509.5-201ENST00000617434 807 ntBASIC4.24□□□□□ -1.73
SOX3P41225 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX3P41225 AC017007.4-201ENST00000503353 1352 ntBASIC4.24□□□□□ -1.73
SOX3P41225 AL391684.1-202ENST00000641293 1636 ntBASIC4.24□□□□□ -1.73
SOX3P41225 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
SOX3P41225 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SOX3P41225 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 AC120338.1-201ENST00000625074 1541 ntBASIC4.23□□□□□ -1.73
SOX3P41225 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SOX3P41225 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SOX3P41225 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SOX3P41225 OR56B2P-201ENST00000317102 954 ntBASIC4.23□□□□□ -1.73
SOX3P41225 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX3P41225 RNU6-207P-201ENST00000384137 107 ntBASIC4.23□□□□□ -1.73
SOX3P41225 MIR141-201ENST00000384975 95 ntBASIC4.23□□□□□ -1.73
SOX3P41225 DEFB130D-201ENST00000426866 237 ntBASIC4.23□□□□□ -1.73
SOX3P41225 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 ELOCP6-201ENST00000429066 328 ntBASIC4.23□□□□□ -1.73
SOX3P41225 ETF1P3-201ENST00000430422 1160 ntBASIC4.23□□□□□ -1.73
SOX3P41225 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX3P41225 TMX2P1-201ENST00000436507 708 ntBASIC4.23□□□□□ -1.73
SOX3P41225 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 ELOCP12-201ENST00000458706 328 ntBASIC4.23□□□□□ -1.73
SOX3P41225 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 AC092905.1-201ENST00000467527 949 ntBASIC4.23□□□□□ -1.73
SOX3P41225 RPL21P18-201ENST00000469899 480 ntBASIC4.23□□□□□ -1.73
SOX3P41225 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 AC002456.2-201ENST00000509356 380 ntBASIC4.23□□□□□ -1.73
SOX3P41225 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.23□□□□□ -1.73
SOX3P41225 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.23□□□□□ -1.73
SOX3P41225 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX3P41225 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX3P41225 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX3P41225 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 AP005119.2-201ENST00000579735 1105 ntBASIC4.23□□□□□ -1.73
SOX3P41225 MIR5096-201ENST00000583713 70 ntBASIC4.23□□□□□ -1.73
SOX3P41225 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX3P41225 AC012254.4-201ENST00000588843 273 ntBASIC4.23□□□□□ -1.73
SOX3P41225 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX3P41225 OR2BH1P-201ENST00000608850 864 ntBASIC4.23□□□□□ -1.73
SOX3P41225 AL133243.1-201ENST00000614487 366 ntBASIC4.23□□□□□ -1.73
SOX3P41225 AC022960.3-201ENST00000619794 441 ntBASIC4.23□□□□□ -1.73
SOX3P41225 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX3P41225 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX3P41225 AC126544.2-201ENST00000625174 749 ntBASIC4.23□□□□□ -1.73
SOX3P41225 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX3P41225 AL137100.1-201ENST00000556703 1620 ntBASIC4.23□□□□□ -1.73
SOX3P41225 HSPA8P17-201ENST00000427029 1382 ntBASIC4.23□□□□□ -1.73
SOX3P41225 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX3P41225 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.22□□□□□ -1.73
SOX3P41225 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.22□□□□□ -1.73
SOX3P41225 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX3P41225 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX3P41225 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX3P41225 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX3P41225 MIR659-201ENST00000384963 97 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms