Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC068724.3-201ENST00000625906 87 ntBASIC4.19□□□□□ -1.74
RORAP35398 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.19□□□□□ -1.74
RORAP35398 AC009452.1-201ENST00000640823 606 ntBASIC4.19□□□□□ -1.74
RORAP35398 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RORAP35398 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.19□□□□□ -1.74
RORAP35398 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RORAP35398 NXPH1-205ENST00000602349 1953 ntBASIC4.18□□□□□ -1.74
RORAP35398 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.18□□□□□ -1.74
RORAP35398 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
RORAP35398 MIR331-201ENST00000362302 94 ntBASIC4.18□□□□□ -1.74
RORAP35398 RNU6-618P-201ENST00000363518 112 ntBASIC4.18□□□□□ -1.74
RORAP35398 RN7SKP227-201ENST00000364445 330 ntBASIC4.18□□□□□ -1.74
RORAP35398 RNA5SP151-201ENST00000365632 117 ntBASIC4.18□□□□□ -1.74
RORAP35398 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RORAP35398 SNORA11F-201ENST00000408237 128 ntBASIC4.18□□□□□ -1.74
RORAP35398 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 AL157884.3-201ENST00000448273 1184 ntBASIC4.18□□□□□ -1.74
RORAP35398 NUTF2P3-201ENST00000448540 384 ntBASIC4.18□□□□□ -1.74
RORAP35398 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 RPS27AP17-201ENST00000463344 455 ntBASIC4.18□□□□□ -1.74
RORAP35398 UQCRHP4-201ENST00000471686 272 ntBASIC4.18□□□□□ -1.74
RORAP35398 AC041039.1-201ENST00000485656 536 ntBASIC4.18□□□□□ -1.74
RORAP35398 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 CYCSP28-201ENST00000534284 321 ntBASIC4.18□□□□□ -1.74
RORAP35398 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.18□□□□□ -1.74
RORAP35398 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.18□□□□□ -1.74
RORAP35398 AC027455.1-201ENST00000574104 594 ntBASIC4.18□□□□□ -1.74
RORAP35398 MIR4458-201ENST00000578872 75 ntBASIC4.18□□□□□ -1.74
RORAP35398 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 AC011477.5-201ENST00000586571 259 ntBASIC4.18□□□□□ -1.74
RORAP35398 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 IPO5P1-202ENST00000600039 287 ntBASIC4.18□□□□□ -1.74
RORAP35398 RPL7P50-201ENST00000600588 727 ntBASIC4.18□□□□□ -1.74
RORAP35398 ARF4P1-201ENST00000605447 541 ntBASIC4.18□□□□□ -1.74
RORAP35398 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.18□□□□□ -1.74
RORAP35398 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.18□□□□□ -1.74
RORAP35398 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RORAP35398 AL669942.2-201ENST00000620352 697 ntBASIC4.18□□□□□ -1.74
RORAP35398 MIR3653-201ENST00000625572 110 ntBASIC4.18□□□□□ -1.74
RORAP35398 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.18□□□□□ -1.74
RORAP35398 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RORAP35398 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.18□□□□□ -1.74
RORAP35398 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RORAP35398 AC134882.1-201ENST00000603738 1676 ntBASIC4.18□□□□□ -1.74
RORAP35398 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.18□□□□□ -1.74
RORAP35398 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RORAP35398 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 AP001002.1-201ENST00000625148 1513 ntBASIC4.17□□□□□ -1.74
RORAP35398 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 RNU1-20P-201ENST00000363314 162 ntBASIC4.17□□□□□ -1.74
RORAP35398 RNU1-132P-201ENST00000364300 164 ntBASIC4.17□□□□□ -1.74
RORAP35398 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 SNORA70C-201ENST00000384538 135 ntBASIC4.17□□□□□ -1.74
RORAP35398 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RORAP35398 AMZ2P2-201ENST00000406819 1057 ntBASIC4.17□□□□□ -1.74
RORAP35398 SNORA74C-2-201ENST00000411179 201 ntBASIC4.17□□□□□ -1.74
RORAP35398 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 AL691447.1-201ENST00000419456 387 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.17□□□□□ -1.74
RORAP35398 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 MTCO1P45-201ENST00000431457 267 ntBASIC4.17□□□□□ -1.74
RORAP35398 UBE2V2P3-201ENST00000433562 437 ntBASIC4.17□□□□□ -1.74
RORAP35398 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 AC005912.1-201ENST00000495392 255 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.17□□□□□ -1.74
RORAP35398 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 MRPL49P2-201ENST00000521066 465 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 AP003730.1-201ENST00000524605 285 ntBASIC4.17□□□□□ -1.74
RORAP35398 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RORAP35398 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.17□□□□□ -1.74
RORAP35398 AL109766.1-201ENST00000555080 552 ntBASIC4.17□□□□□ -1.74
RORAP35398 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.17□□□□□ -1.74
RORAP35398 AC021483.2-201ENST00000567415 758 ntBASIC4.17□□□□□ -1.74
RORAP35398 MTND6P33-201ENST00000571794 183 ntBASIC4.17□□□□□ -1.74
RORAP35398 MIR3160-1-201ENST00000577972 85 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 AL049844.2-201ENST00000604280 628 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC010857.1-201ENST00000606398 594 ntBASIC4.17□□□□□ -1.74
RORAP35398 AP002360.3-201ENST00000607673 710 ntBASIC4.17□□□□□ -1.74
RORAP35398 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC026368.1-201ENST00000614934 690 ntBASIC4.17□□□□□ -1.74
RORAP35398 AC140479.6-201ENST00000633535 357 ntBASIC4.17□□□□□ -1.74
RORAP35398 AL139254.3-201ENST00000641097 674 ntBASIC4.17□□□□□ -1.74
RORAP35398 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.17□□□□□ -1.74
RORAP35398 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
RORAP35398 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RORAP35398 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RORAP35398 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms