Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 STRADBP1-201ENST00000478954 1281 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.51□□□□□ -1.69
CASQ1P31415 AC010342.1-201ENST00000514047 877 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.51□□□□□ -1.69
CASQ1P31415 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.51□□□□□ -1.69
CASQ1P31415 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CASQ1P31415 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.51□□□□□ -1.69
CASQ1P31415 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CASQ1P31415 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.51□□□□□ -1.69
CASQ1P31415 AC079171.1-201ENST00000568788 914 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 MIR1269B-201ENST00000580405 75 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 MIR3667-201ENST00000581025 74 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 MTCO2P22-201ENST00000603246 681 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 AL391261.4-201ENST00000616012 481 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 AC026124.2-201ENST00000621847 656 ntBASIC4.51□□□□□ -1.69
CASQ1P31415 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.51□□□□□ -1.69
CASQ1P31415 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CASQ1P31415 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.51□□□□□ -1.69
CASQ1P31415 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CASQ1P31415 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CASQ1P31415 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CASQ1P31415 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CASQ1P31415 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CASQ1P31415 OR4K17-201ENST00000315543 1032 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CASQ1P31415 RN7SKP103-201ENST00000363848 320 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 RNU6-171P-201ENST00000384354 107 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 MIR1179-201ENST00000408703 91 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.5□□□□□ -1.69
CASQ1P31415 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.5□□□□□ -1.69
CASQ1P31415 AC009263.1-201ENST00000441193 1239 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.5□□□□□ -1.69
CASQ1P31415 RPL23AP62-201ENST00000463396 453 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 RN7SL481P-201ENST00000477764 299 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 PPIAP15-201ENST00000479662 484 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 RPL21P103-201ENST00000479921 488 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.5□□□□□ -1.69
CASQ1P31415 HPRT1P2-201ENST00000505250 544 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 ATP5LP3-201ENST00000514223 304 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.5□□□□□ -1.69
CASQ1P31415 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.5□□□□□ -1.69
CASQ1P31415 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.5□□□□□ -1.69
CASQ1P31415 AC106785.3-201ENST00000564064 847 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.5□□□□□ -1.69
CASQ1P31415 SS18L2P2-201ENST00000583960 235 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.5□□□□□ -1.69
CASQ1P31415 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CASQ1P31415 LLPHP1-201ENST00000603571 367 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 AC020910.2-201ENST00000603635 610 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 AL121612.2-201ENST00000612261 482 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CASQ1P31415 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.5□□□□□ -1.69
CASQ1P31415 AL773545.4-201ENST00000637262 310 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 AL513478.4-201ENST00000641636 310 ntBASIC4.5□□□□□ -1.69
CASQ1P31415 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CASQ1P31415 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.5□□□□□ -1.69
CASQ1P31415 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CASQ1P31415 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CASQ1P31415 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.5□□□□□ -1.69
CASQ1P31415 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.49□□□□□ -1.69
CASQ1P31415 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 RNA5SP305-201ENST00000362665 119 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 RNU6-666P-201ENST00000363499 107 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CASQ1P31415 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.49□□□□□ -1.69
CASQ1P31415 HMGB3P5-201ENST00000428894 612 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.49□□□□□ -1.69
CASQ1P31415 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.49□□□□□ -1.69
CASQ1P31415 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 SETP20-201ENST00000457046 852 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 RNU2-58P-201ENST00000516403 183 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.49□□□□□ -1.69
CASQ1P31415 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 HAUS8P1-201ENST00000549005 542 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.49□□□□□ -1.69
CASQ1P31415 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.49□□□□□ -1.69
CASQ1P31415 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.49□□□□□ -1.69
CASQ1P31415 AC009117.1-201ENST00000563948 554 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.49□□□□□ -1.69
CASQ1P31415 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.49□□□□□ -1.69
CASQ1P31415 AP000255.1-201ENST00000610276 676 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.49□□□□□ -1.69
CASQ1P31415 OR5AC4P-202ENST00000642086 985 ntBASIC4.49□□□□□ -1.69
CASQ1P31415 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms