Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR217-201ENST00000384817 110 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 SNORA40.2-201ENST00000390847 128 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AL035079.1-201ENST00000405210 287 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.69□□□□□ -1.66
ABCD3P28288 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.69□□□□□ -1.66
ABCD3P28288 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCD3P28288 COX5BP7-201ENST00000414780 274 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC073136.2-201ENST00000417282 849 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 MTCO2P17-201ENST00000424336 677 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC234779.1-201ENST00000425910 285 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 Z93242.1-201ENST00000427102 353 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 RPL34P6-201ENST00000432390 345 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC073052.1-201ENST00000440417 714 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC073850.1-201ENST00000449243 255 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 RPL7P31-201ENST00000450192 724 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC079776.3-201ENST00000450665 370 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 NF1P3-201ENST00000457709 450 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 HMGN2P25-201ENST00000486956 268 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 BOLA3P3-201ENST00000505182 232 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC093720.1-201ENST00000505681 714 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC004980.4-201ENST00000513375 203 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 RNU6-311P-201ENST00000516224 102 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 OR5AN2P-201ENST00000534535 896 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.69□□□□□ -1.66
ABCD3P28288 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.69□□□□□ -1.66
ABCD3P28288 MTND3P13-201ENST00000574391 343 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC127024.5-201ENST00000580085 462 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC069545.1-201ENST00000605671 358 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC016877.3-201ENST00000606778 504 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 AC108359.1-201ENST00000616451 1211 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 AP001002.2-201ENST00000625137 386 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCD3P28288 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 LINC01109-201ENST00000603837 3081 ntBASIC4.69□□□□□ -1.66
ABCD3P28288 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
ABCD3P28288 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ABCD3P28288 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCD3P28288 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
ABCD3P28288 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 SAGE4P-201ENST00000442271 3381 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 RNU6-115P-201ENST00000364310 107 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
ABCD3P28288 SNORA70-201ENST00000384436 135 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 SNORD116-23-201ENST00000384645 92 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 MTCO3P31-201ENST00000405526 789 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 RN7SKP247-201ENST00000411094 308 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 OR51B3P-201ENST00000412287 913 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 AL592310.1-201ENST00000414330 671 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 AC093162.1-201ENST00000419682 124 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 COX6CP13-201ENST00000428703 226 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 AC007559.1-201ENST00000428736 355 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 BX323845.1-201ENST00000432417 179 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.68□□□□□ -1.66
ABCD3P28288 NANOGP2-201ENST00000435391 727 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 YWHAZP8-201ENST00000436935 731 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.68□□□□□ -1.66
ABCD3P28288 USP9YP22-201ENST00000438971 294 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 AC092647.3-201ENST00000443044 633 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 CEACAMP7-201ENST00000444105 496 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
ABCD3P28288 AL354714.3-201ENST00000447284 493 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ABCD3P28288 PNPLA4P1-201ENST00000458328 305 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 RNA5SP103-201ENST00000459503 118 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 RPS20P21-201ENST00000466859 343 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.68□□□□□ -1.66
ABCD3P28288 RPL7AP6-201ENST00000477943 801 ntBASIC4.68□□□□□ -1.66
ABCD3P28288 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.68□□□□□ -1.66
ABCD3P28288 RN7SL346P-201ENST00000491561 294 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms