Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
RFX1P22670 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.98□□□□□ -1.29
RFX1P22670 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
RFX1P22670 AC007842.1-201ENST00000597336 2039 ntBASIC6.98□□□□□ -1.29
RFX1P22670 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 MTND4P23-201ENST00000447723 1363 ntBASIC6.98□□□□□ -1.29
RFX1P22670 NLRP3P1-201ENST00000622303 1785 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC006511.3-201ENST00000624929 1783 ntBASIC6.98□□□□□ -1.29
RFX1P22670 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RFX1P22670 RNU4-76P-201ENST00000364509 141 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.98□□□□□ -1.29
RFX1P22670 AL031679.1-201ENST00000400616 525 ntBASIC6.98□□□□□ -1.29
RFX1P22670 HMGB3P20-201ENST00000417997 600 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.98□□□□□ -1.29
RFX1P22670 MTND1P14-201ENST00000427400 950 ntBASIC6.98□□□□□ -1.29
RFX1P22670 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 AC133104.1-201ENST00000429100 218 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC108479.1-201ENST00000431142 427 ntBASIC6.98□□□□□ -1.29
RFX1P22670 GAPDHP59-201ENST00000435908 267 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC002381.1-201ENST00000447049 280 ntBASIC6.98□□□□□ -1.29
RFX1P22670 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.98□□□□□ -1.29
RFX1P22670 PABPC1P3-201ENST00000469174 459 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC034222.1-201ENST00000494052 532 ntBASIC6.98□□□□□ -1.29
RFX1P22670 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.98□□□□□ -1.29
RFX1P22670 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.98□□□□□ -1.29
RFX1P22670 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.98□□□□□ -1.29
RFX1P22670 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.98□□□□□ -1.29
RFX1P22670 AC022861.1-201ENST00000522981 663 ntBASIC6.98□□□□□ -1.29
RFX1P22670 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.98□□□□□ -1.29
RFX1P22670 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX1P22670 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.98□□□□□ -1.29
RFX1P22670 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.98□□□□□ -1.29
RFX1P22670 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.98□□□□□ -1.29
RFX1P22670 AC004805.3-201ENST00000603178 310 ntBASIC6.98□□□□□ -1.29
RFX1P22670 HSPE1P14-201ENST00000605812 302 ntBASIC6.98□□□□□ -1.29
RFX1P22670 SNORD96A-201ENST00000606577 79 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC009268.2-201ENST00000621925 457 ntBASIC6.98□□□□□ -1.29
RFX1P22670 AC091905.1-201ENST00000624400 311 ntBASIC6.98□□□□□ -1.29
RFX1P22670 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.98□□□□□ -1.29
RFX1P22670 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 AC011369.2-201ENST00000624423 1567 ntBASIC6.98□□□□□ -1.29
RFX1P22670 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX1P22670 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RFX1P22670 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RFX1P22670 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RFX1P22670 ERCC6-202ENST00000374127 1782 ntBASIC6.97□□□□□ -1.29
RFX1P22670 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RFX1P22670 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.97□□□□□ -1.29
RFX1P22670 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RFX1P22670 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.97□□□□□ -1.29
RFX1P22670 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 RNU6-877P-201ENST00000383868 107 ntBASIC6.97□□□□□ -1.29
RFX1P22670 RNU6-483P-201ENST00000384088 108 ntBASIC6.97□□□□□ -1.29
RFX1P22670 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RFX1P22670 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.97□□□□□ -1.29
RFX1P22670 U3.43-201ENST00000410734 213 ntBASIC6.97□□□□□ -1.29
RFX1P22670 RPL21P111-201ENST00000418453 477 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.97□□□□□ -1.29
RFX1P22670 MTCO2P5-201ENST00000422621 426 ntBASIC6.97□□□□□ -1.29
RFX1P22670 RPL7P57-201ENST00000423238 740 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AC099782.1-201ENST00000425889 474 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.97□□□□□ -1.29
RFX1P22670 CALM1P1-201ENST00000442082 433 ntBASIC6.97□□□□□ -1.29
RFX1P22670 RPL23AP20-201ENST00000447965 421 ntBASIC6.97□□□□□ -1.29
RFX1P22670 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.97□□□□□ -1.29
RFX1P22670 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.97□□□□□ -1.29
RFX1P22670 RN7SL254P-201ENST00000460609 284 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AC006511.1-201ENST00000470614 315 ntBASIC6.97□□□□□ -1.29
RFX1P22670 RN7SL165P-201ENST00000477476 291 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AC022415.1-202ENST00000486612 523 ntBASIC6.97□□□□□ -1.29
RFX1P22670 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.97□□□□□ -1.29
RFX1P22670 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.97□□□□□ -1.29
RFX1P22670 AC106800.3-201ENST00000511389 308 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.97□□□□□ -1.29
RFX1P22670 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.97□□□□□ -1.29
RFX1P22670 OR5BC1P-201ENST00000529327 739 ntBASIC6.97□□□□□ -1.29
RFX1P22670 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.97□□□□□ -1.29
RFX1P22670 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.97□□□□□ -1.29
RFX1P22670 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.97□□□□□ -1.29
RFX1P22670 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.97□□□□□ -1.29
RFX1P22670 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.97□□□□□ -1.29
RFX1P22670 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms