Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SDC1P18827 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SDC1P18827 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SDC1P18827 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SDC1P18827 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.04□□□□□ -1.76
SDC1P18827 AC093311.1-201ENST00000506586 2021 ntBASIC4.04□□□□□ -1.76
SDC1P18827 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.04□□□□□ -1.76
SDC1P18827 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SDC1P18827 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SDC1P18827 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SDC1P18827 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SDC1P18827 RNA5SP505-201ENST00000364748 108 ntBASIC4.04□□□□□ -1.76
SDC1P18827 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SDC1P18827 RNU6-185P-201ENST00000384421 107 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RNA5SP332-201ENST00000391063 115 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RPS3AP23-201ENST00000401762 784 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RNU2-72P-201ENST00000411175 163 ntBASIC4.04□□□□□ -1.76
SDC1P18827 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.04□□□□□ -1.76
SDC1P18827 AC009302.1-201ENST00000417147 390 ntBASIC4.04□□□□□ -1.76
SDC1P18827 MFSD13B-201ENST00000420133 1290 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC011998.1-201ENST00000433403 117 ntBASIC4.04□□□□□ -1.76
SDC1P18827 ELOCP18-201ENST00000434209 337 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC074367.1-201ENST00000438685 1125 ntBASIC4.04□□□□□ -1.76
SDC1P18827 ELOCP3-201ENST00000439303 348 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AL512326.1-201ENST00000443050 721 ntBASIC4.04□□□□□ -1.76
SDC1P18827 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.04□□□□□ -1.76
SDC1P18827 PHBP16-201ENST00000446318 950 ntBASIC4.04□□□□□ -1.76
SDC1P18827 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.04□□□□□ -1.76
SDC1P18827 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.04□□□□□ -1.76
SDC1P18827 AL121877.1-201ENST00000453704 622 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RPL23AP81-201ENST00000455252 467 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RNU7-27P-201ENST00000459281 62 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RN7SL98P-201ENST00000462271 300 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC010469.1-201ENST00000463864 576 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RPL5P30-201ENST00000465511 891 ntBASIC4.04□□□□□ -1.76
SDC1P18827 METTL15P1-201ENST00000481421 1045 ntBASIC4.04□□□□□ -1.76
SDC1P18827 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.04□□□□□ -1.76
SDC1P18827 AC010468.3-201ENST00000508225 458 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.04□□□□□ -1.76
SDC1P18827 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.04□□□□□ -1.76
SDC1P18827 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.04□□□□□ -1.76
SDC1P18827 RNU6-347P-201ENST00000516658 105 ntBASIC4.04□□□□□ -1.76
SDC1P18827 SNORA76.2-201ENST00000517095 137 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.04□□□□□ -1.76
SDC1P18827 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
SDC1P18827 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.04□□□□□ -1.76
SDC1P18827 AC051619.2-201ENST00000559063 397 ntBASIC4.04□□□□□ -1.76
SDC1P18827 ZNF92P2-201ENST00000600543 1059 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC093765.1-201ENST00000603758 881 ntBASIC4.04□□□□□ -1.76
SDC1P18827 RPL21P136-201ENST00000605378 396 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AC110792.4-201ENST00000609843 298 ntBASIC4.04□□□□□ -1.76
SDC1P18827 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.04□□□□□ -1.76
SDC1P18827 AC007342.8-201ENST00000623278 678 ntBASIC4.04□□□□□ -1.76
SDC1P18827 AP003497.2-201ENST00000624220 967 ntBASIC4.04□□□□□ -1.76
SDC1P18827 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.04□□□□□ -1.76
SDC1P18827 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SDC1P18827 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SDC1P18827 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
SDC1P18827 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SDC1P18827 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.03□□□□□ -1.76
SDC1P18827 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SDC1P18827 AC016588.2-201ENST00000632484 3021 ntBASIC4.03□□□□□ -1.76
SDC1P18827 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SDC1P18827 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.03□□□□□ -1.76
SDC1P18827 AL137100.1-201ENST00000556703 1620 ntBASIC4.03□□□□□ -1.76
SDC1P18827 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SDC1P18827 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SDC1P18827 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.03□□□□□ -1.76
SDC1P18827 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SDC1P18827 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SDC1P18827 MIR448-201ENST00000362131 111 ntBASIC4.03□□□□□ -1.76
SDC1P18827 RNU6-252P-201ENST00000363232 107 ntBASIC4.03□□□□□ -1.76
SDC1P18827 SNORD74.4-201ENST00000364129 80 ntBASIC4.03□□□□□ -1.76
SDC1P18827 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SDC1P18827 AP000357.1-201ENST00000409926 1165 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AL139128.1-201ENST00000413921 941 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC119751.6-201ENST00000416712 186 ntBASIC4.03□□□□□ -1.76
SDC1P18827 RBMY2KP-201ENST00000418221 992 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC092570.3-201ENST00000420113 693 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.03□□□□□ -1.76
SDC1P18827 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.03□□□□□ -1.76
SDC1P18827 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.03□□□□□ -1.76
SDC1P18827 ELOCP8-201ENST00000439309 332 ntBASIC4.03□□□□□ -1.76
SDC1P18827 ELOCP15-201ENST00000442090 332 ntBASIC4.03□□□□□ -1.76
SDC1P18827 EEF1A1P1-201ENST00000447052 739 ntBASIC4.03□□□□□ -1.76
SDC1P18827 PTMAP3-201ENST00000447474 330 ntBASIC4.03□□□□□ -1.76
SDC1P18827 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.03□□□□□ -1.76
SDC1P18827 RAD23BP3-201ENST00000454157 1152 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC133473.1-201ENST00000455173 299 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.03□□□□□ -1.76
SDC1P18827 RPL7P48-201ENST00000461513 746 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.03□□□□□ -1.76
SDC1P18827 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
SDC1P18827 OR51K1P-201ENST00000510214 950 ntBASIC4.03□□□□□ -1.76
SDC1P18827 RNA5SP73-201ENST00000516744 108 ntBASIC4.03□□□□□ -1.76
SDC1P18827 RN7SKP92-201ENST00000517266 244 ntBASIC4.03□□□□□ -1.76
SDC1P18827 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.03□□□□□ -1.76
SDC1P18827 MTND2P7-201ENST00000521337 640 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms