Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.12□□□□□ -1.91
CXCL1P09341 UBE2FP2-201ENST00000566646 462 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.12□□□□□ -1.91
CXCL1P09341 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 MIR5047-201ENST00000579212 100 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 MIR4425-201ENST00000580572 84 ntBASIC3.12□□□□□ -1.91
CXCL1P09341 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CXCL1P09341 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CXCL1P09341 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CXCL1P09341 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CXCL1P09341 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CXCL1P09341 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL1P09341 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CXCL1P09341 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL1P09341 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 RAD17P1-201ENST00000418130 2042 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 OR5P1P-201ENST00000299512 925 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CXCL1P09341 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CXCL1P09341 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL1P09341 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 RAB9AP4-201ENST00000415230 609 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL1P09341 RPL5P32-201ENST00000454085 879 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 DNAJC19P1-201ENST00000455312 319 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL1P09341 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 OR5AN2P-201ENST00000534535 896 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL1P09341 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 AC068714.1-201ENST00000559623 800 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL1P09341 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.11□□□□□ -1.91
CXCL1P09341 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL1P09341 ABI1P1-201ENST00000603375 1120 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 AL031320.1-201ENST00000604177 357 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 AC092653.1-201ENST00000608509 531 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.11□□□□□ -1.91
CXCL1P09341 AP005019.3-201ENST00000620418 560 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 AC091905.1-201ENST00000624400 311 ntBASIC3.11□□□□□ -1.91
CXCL1P09341 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
CXCL1P09341 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CXCL1P09341 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.11□□□□□ -1.91
CXCL1P09341 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CXCL1P09341 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL1P09341 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL1P09341 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL1P09341 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL1P09341 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CXCL1P09341 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL1P09341 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL1P09341 RAD1P1-201ENST00000231383 813 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 RNA5SP435-201ENST00000364044 108 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 SNORD113.2-201ENST00000364166 89 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 SNORA62.2-201ENST00000364672 152 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 SNORA51.8-201ENST00000384234 132 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 RAB5CP1-201ENST00000395972 580 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.1□□□□□ -1.91
CXCL1P09341 SNRPFP1-201ENST00000414761 252 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 RPL23AP4-201ENST00000427757 463 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL1P09341 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.1□□□□□ -1.91
CXCL1P09341 AC073648.4-201ENST00000442655 781 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 UBE2V2P4-201ENST00000447495 259 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL1P09341 AC091685.2-201ENST00000454924 864 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.1□□□□□ -1.91
CXCL1P09341 RN7SL330P-201ENST00000469709 307 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL1P09341 ARL2BPP6-201ENST00000512757 439 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL1P09341 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL1P09341 AP001781.1-201ENST00000530977 207 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 NPM1P35-201ENST00000533043 868 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC025423.2-201ENST00000537570 439 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL1P09341 AC234775.3-201ENST00000564612 656 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms