Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
CTSDP07339 AC233968.1-201ENST00000611212 1300 ntBASIC3.37□□□□□ -1.87
CTSDP07339 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.37□□□□□ -1.87
CTSDP07339 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CTSDP07339 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTSDP07339 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.37□□□□□ -1.87
CTSDP07339 AL132640.2-201ENST00000559968 1698 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTSDP07339 SNORD35B-201ENST00000363660 87 ntBASIC3.36□□□□□ -1.87
CTSDP07339 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTSDP07339 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.36□□□□□ -1.87
CTSDP07339 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSDP07339 RPL26P29-201ENST00000415623 438 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AL158073.1-201ENST00000426848 1104 ntBASIC3.36□□□□□ -1.87
CTSDP07339 NPM1P34-201ENST00000428821 893 ntBASIC3.36□□□□□ -1.87
CTSDP07339 RPL23AP1-201ENST00000428990 471 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AL365396.1-201ENST00000430854 671 ntBASIC3.36□□□□□ -1.87
CTSDP07339 RPS20P1-201ENST00000434853 354 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AL353597.2-202ENST00000434901 373 ntBASIC3.36□□□□□ -1.87
CTSDP07339 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTSDP07339 MTND4LP12-201ENST00000448237 295 ntBASIC3.36□□□□□ -1.87
CTSDP07339 EIF4A1P11-201ENST00000451239 222 ntBASIC3.36□□□□□ -1.87
CTSDP07339 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSDP07339 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSDP07339 RPS29P33-201ENST00000456717 146 ntBASIC3.36□□□□□ -1.87
CTSDP07339 RPS20P4-201ENST00000461659 355 ntBASIC3.36□□□□□ -1.87
CTSDP07339 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.36□□□□□ -1.87
CTSDP07339 USP9YP5-201ENST00000511770 630 ntBASIC3.36□□□□□ -1.87
CTSDP07339 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSDP07339 RNA5SP519-201ENST00000516480 119 ntBASIC3.36□□□□□ -1.87
CTSDP07339 IGLVIV-65-201ENST00000517313 360 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSDP07339 AC105233.3-201ENST00000531125 744 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AP001804.2-201ENST00000533932 910 ntBASIC3.36□□□□□ -1.87
CTSDP07339 CR383656.6-201ENST00000550518 394 ntBASIC3.36□□□□□ -1.87
CTSDP07339 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTSDP07339 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.36□□□□□ -1.87
CTSDP07339 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSDP07339 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSDP07339 AL133457.1-201ENST00000564251 987 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AC022655.2-201ENST00000577280 318 ntBASIC3.36□□□□□ -1.87
CTSDP07339 MIR4330-201ENST00000579077 105 ntBASIC3.36□□□□□ -1.87
CTSDP07339 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTSDP07339 AC023813.4-201ENST00000607580 580 ntBASIC3.36□□□□□ -1.87
CTSDP07339 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSDP07339 AP000346.3-201ENST00000622821 210 ntBASIC3.36□□□□□ -1.87
CTSDP07339 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CTSDP07339 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.36□□□□□ -1.87
CTSDP07339 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTSDP07339 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSDP07339 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTSDP07339 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.35□□□□□ -1.87
CTSDP07339 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CTSDP07339 AC025031.4-201ENST00000621248 3271 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.35□□□□□ -1.87
CTSDP07339 MAPK10-372ENST00000641954 3413 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AL137100.1-201ENST00000556703 1620 ntBASIC3.35□□□□□ -1.87
CTSDP07339 XIAPP3-201ENST00000312918 795 ntBASIC3.35□□□□□ -1.87
CTSDP07339 MIR423-201ENST00000362201 94 ntBASIC3.35□□□□□ -1.87
CTSDP07339 SNORA62.2-201ENST00000364672 152 ntBASIC3.35□□□□□ -1.87
CTSDP07339 MIR129-1-201ENST00000384972 72 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.35□□□□□ -1.87
CTSDP07339 Z98941.1-201ENST00000407764 100 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.35□□□□□ -1.87
CTSDP07339 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CTSDP07339 AC245028.1-201ENST00000423259 256 ntBASIC3.35□□□□□ -1.87
CTSDP07339 BMS1P19-201ENST00000433925 393 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AC006011.1-201ENST00000442758 349 ntBASIC3.35□□□□□ -1.87
CTSDP07339 UBE2V2P4-201ENST00000447495 259 ntBASIC3.35□□□□□ -1.87
CTSDP07339 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.35□□□□□ -1.87
CTSDP07339 DNAJC19P1-201ENST00000455312 319 ntBASIC3.35□□□□□ -1.87
CTSDP07339 RPL7P32-201ENST00000457119 744 ntBASIC3.35□□□□□ -1.87
CTSDP07339 snoU13.1-201ENST00000459157 104 ntBASIC3.35□□□□□ -1.87
CTSDP07339 RN7SL98P-201ENST00000462271 300 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AF213884.1-201ENST00000488102 463 ntBASIC3.35□□□□□ -1.87
CTSDP07339 RPL35P6-201ENST00000490024 372 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AGGF1P3-201ENST00000493675 1213 ntBASIC3.35□□□□□ -1.87
CTSDP07339 KRT19P6-201ENST00000510983 209 ntBASIC3.35□□□□□ -1.87
CTSDP07339 KCTD9P2-201ENST00000512203 1013 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.35□□□□□ -1.87
CTSDP07339 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.35□□□□□ -1.87
CTSDP07339 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.35□□□□□ -1.87
CTSDP07339 AL109741.3-201ENST00000561748 592 ntBASIC3.35□□□□□ -1.87
CTSDP07339 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTSDP07339 AC234771.5-201ENST00000600161 514 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AC017076.1-201ENST00000607613 578 ntBASIC3.35□□□□□ -1.87
CTSDP07339 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.35□□□□□ -1.87
CTSDP07339 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTSDP07339 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTSDP07339 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CTSDP07339 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTSDP07339 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CTSDP07339 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTSDP07339 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.35□□□□□ -1.87
CTSDP07339 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.35□□□□□ -1.87
CTSDP07339 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTSDP07339 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTSDP07339 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTSDP07339 AL592437.2-201ENST00000421655 2434 ntBASIC3.34□□□□□ -1.87
CTSDP07339 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms