Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RPS27AP7-201ENST00000422792 455 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AL732292.1-201ENST00000426692 226 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 VDAC1P6-201ENST00000430062 855 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RPL7P28-201ENST00000437739 740 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RPL23AP52-201ENST00000439311 478 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 ARL5AP3-201ENST00000439327 386 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RSL24D1P2-201ENST00000445584 366 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 TPT1P13-201ENST00000449760 499 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 MORF4L1P4-201ENST00000450245 976 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RPL23AP81-201ENST00000455252 467 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RPL7P32-201ENST00000457119 744 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC006463.2-201ENST00000473326 348 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 HMGB3P14-201ENST00000494195 599 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC010374.1-201ENST00000503762 1237 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 PCNAP1-201ENST00000505363 709 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC005798.1-201ENST00000513715 387 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC010342.1-201ENST00000514047 877 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RNA5SP143-201ENST00000516936 115 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 NARSP2-201ENST00000518524 679 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 IGLVIV-53-201ENST00000520107 367 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC021483.2-201ENST00000567415 758 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC007599.1-201ENST00000568688 1174 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 MTCO2P22-201ENST00000603246 681 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC025946.2-201ENST00000603398 234 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC113403.1-201ENST00000604910 193 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC079791.1-201ENST00000605356 973 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC016911.1-201ENST00000613297 452 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 uc_338.13-201ENST00000618243 179 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC095038.2-201ENST00000621464 1070 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AP003497.2-201ENST00000624220 967 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AL773545.4-201ENST00000637262 310 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AL513478.4-201ENST00000641636 310 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 RNU4-39P-201ENST00000362455 127 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 ELOCP19-201ENST00000411919 318 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 NRBF2P2-201ENST00000413087 861 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC007563.3-201ENST00000433233 371 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 MTCYBP29-201ENST00000436327 1006 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 CBX1P1-201ENST00000440184 427 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 FHP1-201ENST00000442741 703 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 VN1R48P-201ENST00000448149 1036 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 CYCSP42-201ENST00000450823 238 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 RN7SL98P-201ENST00000462271 300 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 RPL5P13-201ENST00000462840 709 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC104629.2-201ENST00000468627 598 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC011276.1-201ENST00000469688 323 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 RN7SL810P-201ENST00000493031 276 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 OR7E10P-201ENST00000526420 991 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 OR8X1P-201ENST00000534542 869 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 GNRHR2P1-201ENST00000555315 631 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 MIR4277-201ENST00000578298 84 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC005191.1-201ENST00000603950 358 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AP000255.1-201ENST00000610276 676 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 MIR6748-201ENST00000610433 71 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms