Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL160175.1-201ENST00000428124 247 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 MTND4LP14-201ENST00000429447 288 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 LYPLA1P1-201ENST00000434514 622 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 BTBD7P2-201ENST00000441962 620 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC025181.1-201ENST00000477507 416 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC008638.1-201ENST00000506035 866 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AP000676.2-201ENST00000529711 301 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC021483.2-201ENST00000567415 758 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 MIR4644-201ENST00000579929 84 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC020910.3-201ENST00000603701 874 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL034351.1-201ENST00000605288 668 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL118556.2-201ENST00000614375 824 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL354696.1-201ENST00000614652 497 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC025016.1-201ENST00000616746 682 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC016769.4-201ENST00000616893 535 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AC068870.2-201ENST00000620635 389 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 AL356490.1-201ENST00000623079 479 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 HSPA8P1-201ENST00000425843 1833 ntBASIC3.23□□□□□ -1.89
HLA-DQA1P01909 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQA1P01909 NOL8P1-201ENST00000508336 3529 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 INTS6P1-201ENST00000504674 2530 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL589826.1-201ENST00000340697 249 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 RNU6-185P-201ENST00000384421 107 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 SNORD66.1-201ENST00000391230 76 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 MTND4P24-201ENST00000424002 397 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC096638.2-201ENST00000434965 711 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 RPL7P11-201ENST00000437586 658 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 MTCO3P43-201ENST00000440974 771 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 FABP3P2-201ENST00000453169 399 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC010307.1-201ENST00000467206 836 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 OR9N1P-202ENST00000494289 481 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 MRPS33P2-201ENST00000507850 322 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 IGKV2-38-201ENST00000517443 247 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 IGKV2D-10-201ENST00000520194 281 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL352979.3-201ENST00000553515 247 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 CKS1BP1-201ENST00000555221 240 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL049870.4-201ENST00000555741 486 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC051619.2-201ENST00000559063 397 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC090515.3-201ENST00000560431 315 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AL731537.2-201ENST00000561565 951 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 MIR548Y-201ENST00000582739 110 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC025175.1-201ENST00000606482 759 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms