Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC007688.1-201ENST00000475592 759 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC006517.1-201ENST00000480485 328 ntBASIC3.9□□□□□ -1.79
TNFP01375 RN7SL323P-201ENST00000494712 295 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.9□□□□□ -1.79
TNFP01375 AC017037.1-201ENST00000508460 471 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.9□□□□□ -1.79
TNFP01375 PPBPP1-201ENST00000510807 373 ntBASIC3.9□□□□□ -1.79
TNFP01375 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TNFP01375 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.9□□□□□ -1.79
TNFP01375 CYCSP30-201ENST00000546447 172 ntBASIC3.9□□□□□ -1.79
TNFP01375 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.9□□□□□ -1.79
TNFP01375 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.9□□□□□ -1.79
TNFP01375 AC074050.1-201ENST00000563247 211 ntBASIC3.9□□□□□ -1.79
TNFP01375 CYP4A43P-201ENST00000568156 121 ntBASIC3.9□□□□□ -1.79
TNFP01375 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.9□□□□□ -1.79
TNFP01375 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 AC015726.1-201ENST00000602353 681 ntBASIC3.9□□□□□ -1.79
TNFP01375 AL137072.1-201ENST00000603444 466 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC245389.2-201ENST00000616023 576 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC006133.1-201ENST00000617106 264 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC242843.1-201ENST00000618702 573 ntBASIC3.9□□□□□ -1.79
TNFP01375 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TNFP01375 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TNFP01375 CYP1D1P-201ENST00000416662 1433 ntBASIC3.89□□□□□ -1.79
TNFP01375 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TNFP01375 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TNFP01375 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.89□□□□□ -1.79
TNFP01375 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TNFP01375 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TNFP01375 SNORA3C-201ENST00000408792 125 ntBASIC3.89□□□□□ -1.79
TNFP01375 Z97055.1-201ENST00000419730 712 ntBASIC3.89□□□□□ -1.79
TNFP01375 HLA-N-201ENST00000437516 135 ntBASIC3.89□□□□□ -1.79
TNFP01375 HMGB3P9-201ENST00000441799 583 ntBASIC3.89□□□□□ -1.79
TNFP01375 RPL21P11-201ENST00000461458 483 ntBASIC3.89□□□□□ -1.79
TNFP01375 AP002812.1-201ENST00000495378 474 ntBASIC3.89□□□□□ -1.79
TNFP01375 PPM1AP1-201ENST00000502740 1135 ntBASIC3.89□□□□□ -1.79
TNFP01375 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.89□□□□□ -1.79
TNFP01375 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TNFP01375 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.89□□□□□ -1.79
TNFP01375 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.89□□□□□ -1.79
TNFP01375 MIR3158-1-201ENST00000583596 81 ntBASIC3.89□□□□□ -1.79
TNFP01375 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.89□□□□□ -1.79
TNFP01375 AC133552.5-201ENST00000604266 540 ntBASIC3.89□□□□□ -1.79
TNFP01375 AC026368.1-201ENST00000614934 690 ntBASIC3.89□□□□□ -1.79
TNFP01375 AC124312.6-202ENST00000623624 418 ntBASIC3.89□□□□□ -1.79
TNFP01375 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.89□□□□□ -1.79
TNFP01375 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TNFP01375 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TNFP01375 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.89□□□□□ -1.79
TNFP01375 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TNFP01375 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TNFP01375 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.88□□□□□ -1.79
TNFP01375 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.88□□□□□ -1.79
TNFP01375 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
TNFP01375 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 RNA5SP399-201ENST00000364003 117 ntBASIC3.88□□□□□ -1.79
TNFP01375 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TNFP01375 SNORA68.2-201ENST00000391263 128 ntBASIC3.88□□□□□ -1.79
TNFP01375 ATP5F1P3-201ENST00000397213 657 ntBASIC3.88□□□□□ -1.79
TNFP01375 SNORA57.3-201ENST00000411095 141 ntBASIC3.88□□□□□ -1.79
TNFP01375 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.88□□□□□ -1.79
TNFP01375 ARL4AP4-201ENST00000434170 518 ntBASIC3.88□□□□□ -1.79
TNFP01375 MAPRE1P3-201ENST00000435438 796 ntBASIC3.88□□□□□ -1.79
TNFP01375 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFP01375 AC090589.1-201ENST00000473109 362 ntBASIC3.88□□□□□ -1.79
TNFP01375 AL133372.1-201ENST00000493565 745 ntBASIC3.88□□□□□ -1.79
TNFP01375 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFP01375 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFP01375 AC006499.6-201ENST00000511169 607 ntBASIC3.88□□□□□ -1.79
TNFP01375 SNORA67.7-201ENST00000516664 135 ntBASIC3.88□□□□□ -1.79
TNFP01375 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.88□□□□□ -1.79
TNFP01375 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFP01375 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.88□□□□□ -1.79
TNFP01375 AC022968.1-201ENST00000567372 442 ntBASIC3.88□□□□□ -1.79
TNFP01375 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFP01375 SNX6P1-201ENST00000601728 1224 ntBASIC3.88□□□□□ -1.79
TNFP01375 AC096553.1-201ENST00000605169 829 ntBASIC3.88□□□□□ -1.79
TNFP01375 AL031666.3-201ENST00000609320 1006 ntBASIC3.88□□□□□ -1.79
TNFP01375 AC009237.17-201ENST00000618111 748 ntBASIC3.88□□□□□ -1.79
TNFP01375 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.88□□□□□ -1.79
TNFP01375 FP236240.3-201ENST00000623061 327 ntBASIC3.88□□□□□ -1.79
TNFP01375 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.88□□□□□ -1.79
TNFP01375 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 THAP12P8-201ENST00000447914 2115 ntBASIC3.88□□□□□ -1.79
TNFP01375 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFP01375 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFP01375 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
TNFP01375 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFP01375 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.87□□□□□ -1.79
TNFP01375 OR52B1P-201ENST00000316506 909 ntBASIC3.87□□□□□ -1.79
TNFP01375 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFP01375 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TNFP01375 MIR200C-201ENST00000384980 68 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms