Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC083795.1-201ENST00000491760 320 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AL035404.1-201ENST00000497982 568 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 OR5H5P-201ENST00000503164 928 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 SNORD46.2-201ENST00000516021 102 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 RNA5SP271-201ENST00000516700 88 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.38□□□□□ -1.55
CNOT4O95628 AP002453.2-201ENST00000533503 320 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 OR4H6P-201ENST00000563771 921 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.38□□□□□ -1.55
CNOT4O95628 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 AL390838.2-201ENST00000602394 274 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 SEPT7P9-203ENST00000604116 343 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 AL158211.4-201ENST00000606988 584 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AL136131.3-201ENST00000607600 188 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 Y_RNA.804-201ENST00000615262 101 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 RFPL4AP6-201ENST00000616792 846 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC012150.2-201ENST00000621300 544 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 DUXAP9-208ENST00000622815 614 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 DCAF13P3-201ENST00000561147 1334 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CNOT4O95628 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.38□□□□□ -1.55
CNOT4O95628 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 AOX3P-204ENST00000491025 2107 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 MTCO1P23-201ENST00000415223 1526 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 GNL2P1-201ENST00000451274 2190 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CNOT4O95628 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 AC026523.2-201ENST00000625039 7739 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CNOT4O95628 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
CNOT4O95628 TMSB4XP4-201ENST00000323496 618 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 MIR130B-202ENST00000385018 82 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 FGF7P8-201ENST00000402994 292 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 CIR1P3-201ENST00000405137 479 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.37□□□□□ -1.55
CNOT4O95628 AL596448.1-201ENST00000415024 392 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 OR51A5P-201ENST00000415429 942 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 RWDD4P2-201ENST00000426392 563 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 MTND1P14-201ENST00000427400 950 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.37□□□□□ -1.55
CNOT4O95628 MTND6P18-201ENST00000439477 513 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC004865.1-201ENST00000442276 1003 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 YWHAQP9-201ENST00000445891 512 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC016027.4-201ENST00000450866 277 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC098824.1-201ENST00000453565 980 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 ACA64.1-201ENST00000459171 127 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 KLF3P2-201ENST00000465138 268 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 RN7SL352P-201ENST00000466002 277 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 RPS3AP17-201ENST00000472594 777 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 RN7SL177P-201ENST00000476596 299 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 RPS4XP14-201ENST00000493072 781 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 RN7SKP238-201ENST00000516483 249 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 AC104383.1-201ENST00000530297 370 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC124947.2-202ENST00000552735 133 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 PCMTD1P2-201ENST00000565017 355 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms