Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PROM1O43490 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 RNU6-532P-201ENST00000384318 107 ntBASIC5.12□□□□□ -1.59
PROM1O43490 RNU6-171P-201ENST00000384354 107 ntBASIC5.12□□□□□ -1.59
PROM1O43490 DBIP1-201ENST00000401435 260 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AL031577.2-201ENST00000404133 280 ntBASIC5.12□□□□□ -1.59
PROM1O43490 NRBF2P2-201ENST00000413087 861 ntBASIC5.12□□□□□ -1.59
PROM1O43490 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.12□□□□□ -1.59
PROM1O43490 NPM1P11-201ENST00000417106 855 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC099336.2-201ENST00000422457 254 ntBASIC5.12□□□□□ -1.59
PROM1O43490 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 OR5BE1P-201ENST00000425977 939 ntBASIC5.12□□□□□ -1.59
PROM1O43490 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 MTCO3P21-201ENST00000430791 643 ntBASIC5.12□□□□□ -1.59
PROM1O43490 CFL1P1-202ENST00000432948 411 ntBASIC5.12□□□□□ -1.59
PROM1O43490 HMGB1P45-201ENST00000435986 653 ntBASIC5.12□□□□□ -1.59
PROM1O43490 RPS26P30-201ENST00000443431 335 ntBASIC5.12□□□□□ -1.59
PROM1O43490 ARL5AP2-201ENST00000444698 533 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AL606662.1-201ENST00000445763 553 ntBASIC5.12□□□□□ -1.59
PROM1O43490 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 AL035090.1-201ENST00000454835 332 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 AC099560.2-201ENST00000457554 255 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC092754.1-201ENST00000472975 479 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AP000797.2-201ENST00000475768 606 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC090114.3-201ENST00000479267 829 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC104687.1-201ENST00000485829 412 ntBASIC5.12□□□□□ -1.59
PROM1O43490 RN7SL184P-201ENST00000488308 297 ntBASIC5.12□□□□□ -1.59
PROM1O43490 PRELID3BP7-201ENST00000503606 469 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 Y_RNA.695-201ENST00000516715 107 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PROM1O43490 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.12□□□□□ -1.59
PROM1O43490 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 AL390334.1-201ENST00000556395 450 ntBASIC5.12□□□□□ -1.59
PROM1O43490 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 BNIP3P26-201ENST00000600827 554 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AL451074.6-201ENST00000608512 729 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC000068.2-201ENST00000608816 460 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC099842.1-201ENST00000619919 596 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC008443.7-201ENST00000622195 246 ntBASIC5.12□□□□□ -1.59
PROM1O43490 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.12□□□□□ -1.59
PROM1O43490 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 OR5BE1P-202ENST00000641168 1176 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC009313.2-201ENST00000417893 1941 ntBASIC5.12□□□□□ -1.59
PROM1O43490 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 PHKBP1-201ENST00000450951 1951 ntBASIC5.12□□□□□ -1.59
PROM1O43490 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
PROM1O43490 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AC005539.1-201ENST00000443768 1479 ntBASIC5.12□□□□□ -1.59
PROM1O43490 AL590763.1-201ENST00000398297 1545 ntBASIC5.12□□□□□ -1.59
PROM1O43490 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PROM1O43490 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.12□□□□□ -1.59
PROM1O43490 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AL450326.2-201ENST00000421913 1962 ntBASIC5.11□□□□□ -1.59
PROM1O43490 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PROM1O43490 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 RNU6-666P-201ENST00000363499 107 ntBASIC5.11□□□□□ -1.59
PROM1O43490 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PROM1O43490 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PROM1O43490 MT-TH-201ENST00000387441 69 ntBASIC5.11□□□□□ -1.59
PROM1O43490 RPS27AP11-201ENST00000402798 447 ntBASIC5.11□□□□□ -1.59
PROM1O43490 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 RN7SKP222-201ENST00000410651 315 ntBASIC5.11□□□□□ -1.59
PROM1O43490 RN7SKP216-201ENST00000411050 312 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AL390774.1-201ENST00000411924 246 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 CEACAMP8-201ENST00000413902 580 ntBASIC5.11□□□□□ -1.59
PROM1O43490 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.11□□□□□ -1.59
PROM1O43490 OR6C64P-201ENST00000419708 825 ntBASIC5.11□□□□□ -1.59
PROM1O43490 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 MTCO1P52-201ENST00000433928 531 ntBASIC5.11□□□□□ -1.59
PROM1O43490 GSTM5P1-201ENST00000434751 660 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 MTCYBP39-201ENST00000437562 491 ntBASIC5.11□□□□□ -1.59
PROM1O43490 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.11□□□□□ -1.59
PROM1O43490 AC079776.3-201ENST00000450665 370 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AL606490.1-201ENST00000452266 765 ntBASIC5.11□□□□□ -1.59
PROM1O43490 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PROM1O43490 AC100832.1-201ENST00000471945 383 ntBASIC5.11□□□□□ -1.59
PROM1O43490 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.11□□□□□ -1.59
PROM1O43490 RPS6P4-201ENST00000494693 758 ntBASIC5.11□□□□□ -1.59
PROM1O43490 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms