Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP005212.4-201ENST00000614206 710 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 MIR7151-201ENST00000617477 60 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 MIR8059-201ENST00000620427 81 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK1AO00322 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 AC074029.4-201ENST00000624796 1859 ntBASIC3.85□□□□□ -1.79
UPK1AO00322 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK1AO00322 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK1AO00322 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.85□□□□□ -1.79
UPK1AO00322 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
UPK1AO00322 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1AO00322 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1AO00322 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1AO00322 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 RPL5P19-201ENST00000404228 893 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 RAC1P3-201ENST00000416129 580 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AL807761.1-201ENST00000417622 171 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.84□□□□□ -1.79
UPK1AO00322 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1AO00322 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1AO00322 APOOP2-201ENST00000461561 539 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 RPS27AP13-201ENST00000498403 237 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1AO00322 KRT19P6-201ENST00000510983 209 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 AC010342.1-201ENST00000514047 877 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 RNU7-143P-201ENST00000516781 65 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 MTCYBP19-201ENST00000517463 1124 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AP003730.1-201ENST00000524605 285 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.84□□□□□ -1.79
UPK1AO00322 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 FAM106CP-201ENST00000582212 507 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 AC006116.5-201ENST00000591936 559 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AC010615.3-201ENST00000597319 394 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 MRPS35P3-201ENST00000603189 709 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AC023813.4-201ENST00000607580 580 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AC090246.1-201ENST00000616499 426 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AL445567.2-201ENST00000618935 498 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 AP002967.1-201ENST00000624203 539 ntBASIC3.84□□□□□ -1.79
UPK1AO00322 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1AO00322 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1AO00322 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
UPK1AO00322 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1AO00322 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1AO00322 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
UPK1AO00322 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
UPK1AO00322 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
UPK1AO00322 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
UPK1AO00322 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.84□□□□□ -1.8
UPK1AO00322 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1AO00322 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1AO00322 AC126755.2-208ENST00000327792 462 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 AC138969.1-213ENST00000331436 462 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 OR6C69P-201ENST00000394268 893 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 AL136131.1-201ENST00000406079 803 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 RN7SKP56-201ENST00000410513 331 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 FAR2P2-201ENST00000413041 594 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1AO00322 AL590806.1-201ENST00000415818 853 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1AO00322 RPL23AP38-201ENST00000423801 469 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 FAR2P4-202ENST00000425399 584 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1AO00322 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1AO00322 NPM1P39-201ENST00000449818 867 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1AO00322 RN7SL93P-201ENST00000463035 293 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
UPK1AO00322 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1AO00322 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1AO00322 AC109635.6-201ENST00000525487 1113 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 CYCSP29-201ENST00000533731 318 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1AO00322 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1AO00322 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1AO00322 AC114878.2-201ENST00000604863 1251 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 ARF4P1-201ENST00000605447 541 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 AP000255.1-201ENST00000610276 676 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1AO00322 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1AO00322 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1AO00322 AC005261.4-201ENST00000600047 1385 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UPK1AO00322 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1AO00322 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1AO00322 Z82217.1-201ENST00000625157 8149 ntBASIC3.83□□□□□ -1.8
UPK1AO00322 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
UPK1AO00322 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms