Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEDD8-MDP1E9PL57 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU1-94P-201ENST00000362627 173 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU1-14P-201ENST00000362759 152 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 Y_RNA.110-201ENST00000363220 99 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU1-13P-201ENST00000384499 162 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RN7SKP235-201ENST00000410662 305 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU2-72P-201ENST00000411175 163 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 SNORA74C-2-201ENST00000411179 201 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RPEP2-201ENST00000432149 701 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 BTF3P10-201ENST00000433415 495 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 CEACAMP1-201ENST00000434624 1035 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL7P22-201ENST00000466005 733 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC093663.2-201ENST00000484625 313 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 KCTD9P2-201ENST00000512203 1013 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL352979.3-201ENST00000553515 247 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC027455.1-201ENST00000574104 594 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC005242.1-201ENST00000585658 438 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 VN1R85P-201ENST00000601587 426 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL161729.3-201ENST00000603533 673 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL671309.1-201ENST00000603750 544 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC010201.1-201ENST00000605051 540 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC135178.6-201ENST00000605314 398 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC005972.3-201ENST00000606304 481 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AC024941.1-201ENST00000612250 334 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 MIR492-201ENST00000638676 116 ntBASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NEDD8-MDP1E9PL57 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 SPRR2C-201ENST00000290702 219 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 RNU1-44P-201ENST00000384453 163 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 ATP5F1P2-201ENST00000398143 760 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 EIF1P3-201ENST00000423841 334 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 COX6CP15-201ENST00000426313 211 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 COX6B1P7-201ENST00000430845 235 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AL157827.1-201ENST00000447622 132 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 CYCSP53-201ENST00000455540 265 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 RWDD4P1-201ENST00000488019 565 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 RPS27AP13-201ENST00000498403 237 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AL592156.1-201ENST00000508758 304 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC103833.1-201ENST00000517442 172 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 BNIP3P5-201ENST00000562290 498 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC090948.2-201ENST00000607363 564 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 FAM27D1-201ENST00000612308 341 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AL512506.1-201ENST00000613918 449 ntBASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD8-MDP1E9PL57 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms