Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 DUXAP6-201ENST00000553858 601 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AGGF1P6-201ENST00000569213 976 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC022662.1-201ENST00000580252 331 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC021171.1-201ENST00000603137 706 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AL583832.1-201ENST00000603227 784 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AL392112.1-201ENST00000605115 829 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC099676.1-201ENST00000608886 657 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 MIR6862-1-201ENST00000613016 70 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 MIR6862-2-201ENST00000614755 70 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 U6.48-201ENST00000618523 106 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AL158163.2-201ENST00000619110 700 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 CR381572.2-201ENST00000624852 397 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC092608.3-201ENST00000625017 386 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 MFSD8-245ENST00000641743 948 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 IRF5P1-201ENST00000504852 2164 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 HSPA8P17-201ENST00000427029 1382 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 SAMMSON-226ENST00000642089 1582 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RN7SKP104-201ENST00000362605 328 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RNA5SP123-201ENST00000363244 119 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 SNORD113-6-201ENST00000363345 75 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-1214P-201ENST00000363650 109 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RNU4-40P-201ENST00000364351 143 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RNU6-413P-201ENST00000384115 107 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 SNORA11.3-201ENST00000408471 128 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 MIR1303-201ENST00000408625 86 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 Z74021.1-201ENST00000423610 407 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 USP9YP11-201ENST00000427537 717 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 CNOT7P1-201ENST00000429006 852 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 MOB1AP1-201ENST00000430903 535 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC007327.1-201ENST00000447461 264 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC073850.1-201ENST00000449243 255 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 MRPL42P4-201ENST00000453267 443 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC079168.2-201ENST00000453977 416 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 BX248409.1-201ENST00000455497 255 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RPL21P6-201ENST00000479171 504 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RN7SL214P-201ENST00000487317 265 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC109462.1-201ENST00000491087 368 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RNU5A-4P-201ENST00000516588 111 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC090022.1-201ENST00000546569 311 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 HAUS8P1-201ENST00000549005 542 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 ZNF321P-202ENST00000550843 495 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC068790.7-201ENST00000602347 528 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AP000238.1-201ENST00000608759 426 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC097505.1-201ENST00000610199 565 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC009163.6-201ENST00000612367 342 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC024257.5-201ENST00000612739 531 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 EIF3FP1-201ENST00000613970 806 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 SNORA11.6-201ENST00000619030 128 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC091304.6-201ENST00000619761 202 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC074140.1-201ENST00000621617 208 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AC112694.2-201ENST00000623697 768 ntBASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
TCRBV7S3A2A0A539 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TCRBV7S3A2A0A539 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms